Job Description P00722 Confidence 100.00% Date Thu Jan 5 10:56:50 GMT 2012 Rank 22 Aligned Residues 289 % Identity 21% Template d1uuqa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.5

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390												.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence																											.	.																															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		V	R	I	E	N	G	L	L	L	L	N	G	K	P	L	L	I	R	G	V	N	R	H	E	H	.	.	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	N	H	P	.	.	.	.	.
Query Conservation																											.	.																															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence																											.	.																															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation
Template Sequence		V	R	V	N	G	G	H	F	E	L	Q	G	K	P	Y	V	I	T	G	V	N	M	W	Y	A	A	Y	L	G	A	P	N	E	V	G	D	R	D	R	L	A	K	E	L	D	N	L	K	A	I	G	V	N	N	L	R	V	L	A	V	S	E	K	S	E	I	N	S	A	V	K	P	A	V	T	N	G	F	G	N
Template Known Secondary structure						T	T					T	T											T	T					T		S	S	T	T																T	T											B				S	T	T	S		S	S		S	B	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
												398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																													.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	T	D	D	P	R	W	L	P	A	M	S	E
Query Conservation		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	E	T	L	L	Q	G	L	D	Y	L	L	V	E	L	A	K	R	D	M	T	V	V	L	Y	F	N	N	F	W	Q	W	S	G	G	M	T	Q	Y	M	A	W	I	E	G	E	P	V	Q	D	P	N	V	T	N	E	W	E	A	F	M	A	K	S	A	S	F	Y	R	S	E	K	A	Q	Q	E	Y	R	K
Template Known Secondary structure		B																		T	T									B	S	S	S	T	T												T																					G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		440	.	.	.	.	.	.	.									.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.														.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		R	V	T	R	M	V	Q	R	.	.	.	.	.	.	.	.	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	G	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	.	.	.	.
Query Conservation										.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		T	L	E	K	I	I	T	R	V	N	S	I	N	G	K	A	Y	V	D	D	A	T	I	M	S	W	Q	L	A	N	E	P	R	P	G	N	S	Q	T	T	A	E	E	K	Q	I	Y	I	D	W	V	H	A	A	A	A	Y	I	K	T	L	D	A	H	H	L	V	S	S	G	S	E	G	E	M	G	S	V	N	D
Template Known Secondary structure								T		B		T	T	T			B	G	G	G		T	T						S		B	S			S		S	T	T																									S	S	S								S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
												495	.	.	.	.	500	.	.	.		.	.	.												.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.										.				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.										.				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	A	T	D	I	I	C	P	M	.	Y	A	R	.	.	.	.	.	.	.	.	.	.	.	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.										.				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.										.				.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation
Template Sequence		M	Q	V	F	I	D	A	H	A	T	P	D	I	D	Y	L	T	Y	H	M	W	I	R	N	W	S	W	F	D	K	T	K	P	A	E	T	W	P	S	A	W	E	K	A	Q	N	Y	M	R	A	H	I	D	V	A	K	Q	L	N	K	P	L	V	L	E	E	F	G	L	D	R	D	M	G	S	Y	A	M	D	S
Template Known Secondary structure											S	T	T			S							T	T	T	T	T	S	S		T	T	S																											T													G	G	G				T	T	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
														550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																								.	.	.
Template Sequence		T	T	E	Y	R	D	N	Y	F	R	G	V	F	E	L	M	L	A	S	L	E	Q	G	E	P	S	A	G	Y	N	I	W	A	W	N	G	Y	G	.	.	.	R	T	T	R	A	N	Y	W	W	Q	E	G	D	D	F	M	G	D	P	P	Q	E	E	Q	G	M	Y	G	V	F	D	T	D	T	S	T	I	A	I
Template Known Secondary structure																							T	T		S							S					T		.	.	.					T	T					T	T	S				S	S		T	T	S		T	T	S	S				T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		618	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	A	K	H	Q	Q	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	E	F	N	A	R	F	Q	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions