Job Description P00722 Confidence 98.85% Date Thu Jan 5 10:56:50 GMT 2012 Rank 90 Aligned Residues 256 % Identity 16% Template d1us3a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-glycanases Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390																.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	N	H	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		F	P	I	G	V	A	V	S	N	T	D	S	A	T	Y	N	L	L	T	N	S	R	E	Q	A	V	V	K	K	H	.	.	.	.	F	N	H	L	T	A	G	N	I	M	K	M	S	Y	M	Q	P	T	E	G	N	F	N	F	T	N	A	D	A	F	V	D	W	A	T	E	N	N	M	T	V	H	G	H	A	L
Template Known Secondary structure									B		T	T		T	T	T	B	T	T	T												.	.	.	.		S					S	S	T	T	S						S	B	T	T	B																T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		416	.	.	.	420	.	.	.	.					.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.																						.	.	.	.	.	.	470
Predicted Secondary structure											.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	T	H	G	M	V	P	M	.	.	.	.	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	G	A	N	H	D
Query Conservation											.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	H	S	D	Y	Q	V	P	N	F	M	K	N	W	A	G	S	A	E	D	F	L	A	A	L	D	T	H	I	T	T	I	V	D	H	Y	E	A	K	G	N	L	V	S	W	D	V	V	N	E	A	I	D	D	N	S	P	A	N	F	R	T	T	D	S	A	F	Y	V	K	S	G	N	S	S	V	Y	I	E
Template Known Secondary structure						G	G	G	S						T			S																																				B		S	S	S	S			B			T	T							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.																				.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		R	A	F	Q	T	A	R	A	A	D	P	A	V	I	L	Y	Y	N	D	Y	N	I	E	Q	N	N	A	K	T	T	K	M	V	D	M	V	K	D	F	Q	A	R	S	I	P	I	D	G	V	G	F	Q	M	.	.	.	.	H	V	C	M	N	Y	P	S	I	A	N	I	S	A	A	M	K	K	V	V	D	L	G
Template Known Secondary structure												T	T	S							S	S	T	T	S		S																T	T											.	.	.	.				S	S		S														T	T	T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.					.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.																						550	.	.	.	.	.	.	.	.	.	560	.	.	.	.				.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	.	.	.	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	K	I	T	E	L	D	V	A	V	N	Q	P	H	C	D	A	Y	P	A	N	K	I	N	P	L	T	E	A	A	Q	L	A	Q	K	K	R	Y	C	D	V	V	K	A	Y	L	D	T	V	P	V	N	Q	R	G	G	I	S	V	W	G	T	T	D	.	.	.	.	.	.	.	.	.	.	.	A	N	T
Template Known Secondary structure													S	S		T	T	S	T	T	T	T	T	T				S																								S		G	G	G							S		S	B	G	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.												.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	D	G	L	Y	R	E	Q	F	E	D	E	K	I	S	W	P	L	L	F	D	N	N	Y	N	D	K	P	A	L	R	G	F	A	D	A	L
Template Known Secondary structure							T	T	T	T	T	T	T							S	S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions