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Job DescriptionP00722
Confidence100.00%DateThu Jan 5 10:56:50 GMT 2012
Rank24Aligned Residues288
% Identity17%Templated1tg7a5
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Glycosyl hydrolases family 35 catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRC. . . . . SHYPNH. . . . . . . . . . . PLW
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Template Sequence  VTWDEHSIFVNGERLMIFSGEVHPY. . . . . RLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPF
Template Known Secondary structure 
SS
TT


GG.....GS

GGGTTT




SBTTB



GGG
S
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   46...50.........60.........70 .........80.........90.........100.........110.........120
 
   400.........410.........420........ .430.........440........ .450.........460..
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Query Sequence  YTLCDRYGLYVVDEANIETHGMVPMNRLT. . . . . . . . . . . . DDPRWLPAMSERVTRMVQRD. . . . . RNHPSVIIWSLGNE
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Template Sequence  FDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENE
Template Known Secondary structure  T


S


TTBGGGG

GGGGG
SS
TTSS
TBGGGTSS

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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   463......470.........480.........490.. .......500.........510.........
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Query Sequence  . . . . . . . . . . SGHGANHDALYRWIKSVDPSRPVQYEGGGA. . . . . . . . . . . . . DTTATDIICPMYARVDEDQPFPAVPKW
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Template Sequence  YSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPT
Template Known Secondary structure 




TT



S
TT

S
BB

BSSSS
TT
TTS
TT

SB

TT
S

S
TT


TT
S

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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   520.........530.........540.........550.........560.........570.........580.........590. .......
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Query Sequence  SIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGG. DFGDTPN
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Template Sequence  YFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLN. . . . LYMIFGGTNWGNLGH
Template Known Secondary structure 

TTS

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TT


TSTTT
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   281........290.........300.........310.........320.........330.........340. ........350......
 
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Query Sequence  DRQFC. . . MNGLVFADRTPH. PALTEAKHQQQFFQFRL
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Template Sequence  PGGYTSYDYGSAISESRNITREKYSELKLLGNFAKVSP
Template Known Secondary structure  TTS
SB

TT
SB
TT



ST

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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