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Job DescriptionP00722
Confidence98.76%DateThu Jan 5 10:56:50 GMT 2012
Rank94Aligned Residues198
% Identity19%Templated1edga_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390 ......... 400.........410.... .....420.........430.....
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Query Sequence  VQDILLMKQNNFNAVRC. . . . . . . . . . SHYPNHPLW. . . . . . . YTLCDRYGLYVVDEA. NIETHGMVPMNRLTDDPRWLP
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Template Sequence  KQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKK
Template Known Secondary structure  T





GGGTTTT
TTT


S
B
TTTSB
SSGGG
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   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   436...440.........450.........460...... ...470.........480 .........
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Query Sequence  AMSERVTRMVQRDRNHPSVIIWSLGNESGHG. . . . . . . . . . . . . . . . . . . . . . . ANHDALYRWIKSVD. . . PSRPVQYEG
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Template Sequence  YITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPG
Template Known Secondary structure  TTT

TT

SS


TTSTTTTS

TT
T
GGGGTS

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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   490........ .500.........510... ......520.........530....
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Query Sequence  GGADTTATD. . . . . . . . . . . . . . . . . IICPMYARVDEDQPF. . . . . . . . . . . . . . . . . . PAVPKWSIKKWLSLPGETRPL
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Template Sequence  YVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPV
Template Known Secondary structure  GGG
STT






TT

S



STS
GGGT





TT
TGGGT

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   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   535....540.........550.........560 .........570.
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Query Sequence  ILCEYAHAMGNSLGGFAKYWQAFRQY. . PRLQGGFVWDW
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Template Sequence  IIGECGAVDKNNLKTRVEYMSYYVAQAKARGILCILWDN
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TT



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   304.....310.........320.........330.........340..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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