Job Description P00722 Confidence 99.57% Date Thu Jan 5 10:56:50 GMT 2012 Rank 56 Aligned Residues 258 % Identity 16% Template c3pzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:mannan endo-1,4-beta-mannosidase. glycosyl hydrolase family PDBTitle: structure of the hyperthermostable endo-1,4-beta-d-mannanase from2 thermotoga petrophila rku-1 with maltose and glycerol Resolution 1.92 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		F	R	F	I	G	S	N	N	Y	.	.	.	.	.	Y	M	H	Y	K	S	N	R	M	I	D	S	V	L	E	S	A	R	D	M	G	I	K	V	L	R	I	W	G	F	L	D	G	E	S	Y	C	R	D	K	N	T	Y	M	H	P	E	P	G	V	F	G	V	P	E	G	I	S	N	A	Q	N	G	F	E	R
Template Known Secondary structure										S	.	.	.	.	.		T	T	T	S																T											B	S								T			S	B	S	B	T	T	B		S	S		T	T			S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
			397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.													.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.									.	.	450	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		.	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	.	.	.	.	.	.	.	.	.	.	.	.	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	.	.	.	.	.	.	.	.	D	R	N	H	P	S	V	I
Query Conservation		.																			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	Y	T	I	A	K	A	K	E	L	G	I	K	L	I	I	V	L	V	N	N	W	D	D	F	G	G	M	N	Q	Y	V	R	W	F	G	G	T	H	H	D	D	F	Y	R	D	E	R	I	K	E	E	Y	K	K	Y	V	S	F	L	I	N	H	V	N	V	Y	T	G	V	P	Y	R	E	E	P	T	I	M
Template Known Secondary structure													T									B	S	S	S	T	T	S									T	T		S	S	G	G	G	G	G	T																			B		T	T	T			B	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		456	.	.	.	460	.	.	.	.	.	.										.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.																															.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	W	S	L	G	N	E	S	G	H	G	.	.	.	.	.	.	.	.	.	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A
Query Conservation													.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	E	L	A	N	E	L	R	C	E	T	D	K	S	G	N	T	L	V	E	W	V	K	E	M	S	S	Y	I	K	S	L	D	P	N	H	L	V	A	V	G	D	E	G	F	F	S	N	Y	E	G	F	K	P	Y	G	G	E	A	E	W	A	Y	N	G	W	S	G	V	D	W	K	K	L	L	S	I	E	T
Template Known Secondary structure					S		B	T				T	T		T	T	S																			S	S	S											B			T	T				G	G	G		S	G	G	G	T	B	T	T	T	S								T		T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.			560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure																															.	.	.	.																																			.	.
Query SS confidence																															.	.	.	.																																			.	.
Query Sequence		T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	.	.	.	.	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R	Q	.	.	Y	P	R	L	Q	G	G	F	V	W	D
Query Conservation																															.	.	.	.																																			.	.
Alig confidence																															.	.	.	.																																			.	.
Template Conservation
Template Sequence		V	D	F	G	T	F	H	L	Y	P	S	H	W	G	V	S	P	E	N	Y	A	Q	W	G	A	K	W	I	E	D	H	I	K	I	A	K	E	I	G	K	P	V	V	L	E	E	Y	G	I	P	K	S	A	P	V	N	R	T	A	I	Y	R	L	W	N	D	L	V	Y	D	L	G	G	D	G	A	M	F	W	M
Template Known Secondary structure				S							T	T	T	T	T			G	G	G																				T												T	T	S	S	S																	T		S					S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	S	D	R	D	E	R	G	Y	Y	P	D	Y	D	G	F	R	I	V	N	D	D	S	P	E	A	E	L	I	R	E	Y	A	K	L	F
Template Known Secondary structure		B			B		.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	B			T	T	S	B				S	S	S			B		S	S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.														.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions