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Job DescriptionP00722
Confidence99.09%DateThu Jan 5 10:56:50 GMT 2012
Rank81Aligned Residues196
% Identity13%Templatec3ndyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endoglucanase d; PDBTitle: the structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390 ..... ....400.........410.........420.........430.....
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Query Sequence  VQDILLMKQNNFNAVRC. . . . . SHYPN. . . . . . . . . . . . . HPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLP
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Template Sequence  HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVI. . INLHHENEWLKPFYANEAQVKA
Template Known Secondary structure  T





TTSB

TTT

B
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S
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   48.50.........60.........70.........80.........90.........100... ......110.........120.....
 
   436...440.........450.........460....... ..470.........480 .........490..
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Query Sequence  AMSERVTRMVQRDRNHPSVIIWSLGNESGHGA. . . . . . . . . . . . . . . . . . NHDALYRWIKSVD. . . PSRPVQYEGGGA. .
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Template Sequence  QLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASA
Template Known Secondary structure  TTT

TTS
S




SGGGTTS


T
GGGGTS

GGG

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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   493......500.........510.........520........ .530.........540........
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Query Sequence  . . . . . . . . . . . DTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLP. . . . . . . . . . . . . GETRPLILCEYAHAMGNSLG
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Template Sequence  MSTTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRAVVIGEMGSINKNNTA
Template Known Secondary structure  ST


GGG
TT


ST
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TGGGT





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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   549550.........560 .........570.
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Query Sequence  GFAKYWQAFRQY. . PRLQGGFVWDW
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Template Sequence  ARVTHAEYYAKSAKARGLTPIWWDN
Template Known Secondary structure  TTT



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   286...290.........300.........310
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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