Job Description P00722 Confidence 98.90% Date Thu Jan 5 10:56:50 GMT 2012 Rank 89 Aligned Residues 197 % Identity 17% Template c3kzsD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:glycosyl hydrolase family 5; PDBTitle: crystal structure of glycosyl hydrolase family 5 (np_809925.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution Resolution 2.10 Å

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		332	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	R	E	V	R	I	E	N	G	L	L	L	L	.	N	G	K	P	L	L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.												.	.	.								.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.								.
Template Sequence		G	K	L	V	V	S	E	E	G	R	Y	L	K	H	E	N	G	T	P	F	F	W	L	G	E	T	.	.	.	G	W	L	L	P	E	R	.	L	N	R	D	E	A	E	Y	Y	L	E	Q	C	K	R	R	G	Y	N	V	I	Q	V	Q	T	L	N	N	V	P	S	X	N	I	Y	G	Q	Y	S	X	T	D	G
Template Known Secondary structure			S					T	T	S	S	S				T	T	S		B								.	.	.		T	T					.															T	T	T								S		S	S	S	S		B		T	T			B	S		S	S	T
Template Predicted Secondary structure																												.	.	.								.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
																		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																																				.
Template Conservation																																					.	.	.	.	.	.	.																																				.
Template Sequence		Y	N	F	K	N	I	N	Q	K	G	V	Y	G	Y	W	D	H	X	D	Y	I	I	R	T	A	A	K	K	G	L	Y	I	G	X	V	.	.	.	.	.	.	.	C	I	W	G	S	P	V	S	H	G	E	X	N	V	D	Q	A	K	A	Y	G	K	F	L	A	E	R	Y	K	D	E	P	N	I	I	.	W	F
Template Known Secondary structure		T			T	T				T	T																		T	T							.	.	.	.	.	.	.		S							T	T	S	S																	T	T		S	S			.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.																																				.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.
		459	460	.	.				.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.									.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence						.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		L	G	N	E	.	.	.	S	G	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	.	.	.	.	.	.	.	.	A	D	T	T	A	T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L
Query Conservation						.	.	.																														.	.	.	.	.	.	.	.
Alig confidence						.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	G	D	I	R	G	D	V	K	T	A	E	W	E	A	L	A	T	S	I	K	A	I	D	K	N	H	L	X	T	F	H	P	R	G	R	T	T	S	A	T	W	F	N	N	A	P	W	L	D	F	N	X	F	Q	S	G	H	R	R	Y	G	Q	R	F	G	D	G	D	Y	P	I	E	E	N	T	E	E	D
Template Known Secondary structure				S	S			T	T	S	S																	S	S								B	T		B	T					T	T		T	T			B				B			S			T	T			S	S	S	S			S	S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		528											.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	G	E	T	R	P	L	I	L	C	E	Y	A
Query Conservation			.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	W	R	F	V	E	R	S	X	A	X	K	P	X	K	P	V	I	D	G	E	P	I
Template Known Secondary structure		T									T	S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions