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Job DescriptionP00722
Confidence98.90%DateThu Jan 5 10:56:50 GMT 2012
Rank89Aligned Residues197
% Identity17%Templatec3kzsD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:glycosyl hydrolase family 5; PDBTitle: crystal structure of glycosyl hydrolase family 5 (np_809925.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   332.......340..... ....350.........360.........370.........380.........390....
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Query Sequence  GFREVRIENGLLLL. NGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYP. . . . . . . . . . . . . . . .
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Template Sequence  GKLVVSEEGRYLKHENGTPFFWLGET. . . GWLLPER. LNRDEAEYYLEQCKRRGYNVIQVQTLNNVPSXNIYGQYSXTDG
Template Known Secondary structure 
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TTSSSTTS
B

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B
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   36...40.........50.........60. ....... .70.........80.........90.........100.........110.
 
   395....400.........410.........420.........430.........440.........450........
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Query Sequence  . . . . . . . . . . . . . . . . NHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWS
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Template Sequence  YNFKNINQKGVYGYWDHXDYIIRTAAKKGLYIGXV. . . . . . . CIWGSPVSHGEXNVDQAKAYGKFLAERYKDEPNII. WF
Template Known Secondary structure  T

TT


TT


TT
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S
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   112.......120.........130.........140...... ...150.........160.........170.........180. ..
 
   459460.. .......470.........480.........490. ........500.........510.........520.......
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Query Sequence  LGNE. . . SGHGANHDALYRWIKSVDPSRPVQYEGGG. . . . . . . . ADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSL
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Template Sequence  IGGDIRGDVKTAEWEALATSIKAIDKNHLXTFHPRGRTTSATWFNNAPWLDFNXFQSGHRRYGQRFGDGDYPIEENTEED
Template Known Secondary structure  SS

TTSS

SS


BT
BTTT
TT

BB

S

TT

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SS
TT
TT
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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   528 .530.........540
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Query Sequence  P. . . . . . . . . . GETRPLILCEYA
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Template Sequence  NWRFVERSXAXKPXKPVIDGEPI
Template Known Secondary structure  TTSSS


SS

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   264.....270.........280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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