Job Description P00722 Confidence 88.24% Date Thu Jan 5 10:56:50 GMT 2012 Rank 166 Aligned Residues 275 % Identity 13% Template c3gtnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucuronoxylanase xync; PDBTitle: crystal structure of xync from bacillus subtilis 168 Resolution 2.68 Å

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		381	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.								430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	.	S	H	Y	P	N	H	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	.	.	.	.	.	.	.	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R
Query Conservation												.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	L	G	F	S	I	L	R	I	H	V	D	E	N	R	N	N	W	Y	K	E	V	E	T	A	K	S	A	V	K	H	G	A	I	V	F	A	S	P	W	N	P	P	S	D	M	V	E	T	F	N	R	N	G	D	T	S	A	K	R	L	K	Y	N	K	Y	A	A	Y	A	Q	H	L	N	D	F	V	T	F
Template Known Secondary structure		T													S	S	T	T	S	G	G	G	G										T	T								S	S			G	G	G						S	S	S		T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460			.	.	.						.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.														.	.	.	500	.	.	.	.
Predicted Secondary structure															.	.				.	.	.	.	.																			.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.				.	.	.	.	.																			.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	N	H	P	S	V	I	I	W	S	L	G	.	.	N	E	S	.	.	.	.	.	G	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	.	.	.	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	I	I	C	P	M	Y
Query Conservation															.	.				.	.	.	.	.																			.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.									.	.				.	.	.	.	.																			.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		M	K	N	N	.	G	V	N	L	Y	A	I	S	V	Q	N	E	P	D	Y	A	H	E	W	T	W	W	T	P	Q	E	I	L	R	F	M	R	E	N	A	G	S	I	N	A	R	V	I	A	P	E	S	F	Q	Y	L	K	N	L	S	D	P	I	L	N	D	P	Q	A	L	A	N	M	D	I	L	G	T	H	L
Template Known Secondary structure					T	.	T				S				S		S	S	T	T	S		T	T	S		B													T	T	T	T		S	S								T	T			G	G	G	T					T									S
Template Predicted Secondary structure						.
Template SS confidence
		125	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	G	T	Q	V	S	Q	F	P	Y	P	L	F	K	Q	K	G	A	G	K	D	L	W	M	T	E	V	Y	Y	P	N	S	D	T	N	S	.	.	.	.	.	.	.	.	.	.	.	A	D	R	W	P	E	A	L	D	V	S	Q	H	I	H	N	A	M	V	E	G	D	F	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T			G	G	G	S										T	T											S				T	T		.	.	.	.	.	.	.	.	.	.	.	T	T		T	T	T	T													T	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.												240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																				.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q	Q	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	R	L	S	G	Q	T	I	E	V	T	S	E	Y	L	F
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	W	W	Y	I	R	R	.	.	.	.	.	.	.	.	.	.	.	S	Y	G	P	M	K	E	D	G	T	I	S	K	R	G	Y	N	M	A	H	F	S	K	F	V	R	P	G	Y	V	R	I	D	A	T	K	N	P	N	A	N	V	Y	V	S	A	Y	K	G	D	N	K	V	V	I	V	A	I	N	K	S
Template Known Secondary structure							S	B	S	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	B		T	T	S		B												T	T	S		T	T								S			S	T	T									T	T										S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.												.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		646	.	.	.	650	.	.	.	.	.	.																			.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	S	D	N	E	L	L	H	W	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	D	G	K	P	L	A	S	G	E	V	P	L	D	V	A	P	Q	G	K	Q	L	I	E	L	P	E	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	G	V	N	Q	N	F	V	L	Q	N	G	S	A	S	N	V	S	R	W	I	T	S	S	S	S	N	L	Q	P	G	T	N	L	T	V	S	G	N	H	F	W	A	H	L	P	A	Q	S	V	T	T	F	V	V	N	R	L
Template Known Secondary structure		S	S										S	S												T	T													S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions