 |
Job Description | P00722 | Confidence | 26.40% | Date | Thu Jan 5 10:56:50 GMT 2012 |
Rank | 241 | Aligned Residues | 70 |
% Identity | 17% | Template | c3fs2A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; |
PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution
|
Resolution | 1.85 Å |
|
 |
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 400 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
V | R | I | E | N | G | L | L | L | L | N | G | K | P | L | L | I | R | G | V | N | R | H | E | H | H | P | L | H | G | Q | V | M | D | E | Q | T | M | V | Q | D | I | L | L | M | K | Q | N | N | F | N | A | V | R | C | S | H | Y | P | N | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | L | W | Y | T | L | C |
Query Conservation |   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|   |
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |
Template Sequence |   |
V | K | V | G | N | V | T | F | S | N | S | A | P | L | A | L | I | A | G | P | C | Q | M | E | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | D | H | A | F | E | M | A | G | R | L | K | E | M | T | D | K | L | G | I | G | L | V | Y | K | S | S | F | D | K | A | N | I | G | L | E | K | A | L | E | V | F | S | D | L | K |
Template Known Secondary structure |   |
 |  |  | T | T |  |  |  |
| T | T | S |
|
|  |  |  |  |  |
| S | B |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| B |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | Y | G | L | Y | V | V | D | E | A |
Query Conservation |   |
|
|   |
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |
|
|   |
Template Sequence |   |
K | E | Y | G | F | P | V | L | T | D | I |
Template Known Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|