Job Description P00722 Confidence 55.57% Date Thu Jan 5 10:56:50 GMT 2012 Rank 196 Aligned Residues 62 % Identity 11% Template c3flpJ_ PDB info PDB header:sugar binding protein Chain: J: PDB Molecule:sap-like pentraxin; PDBTitle: crystal structure of native heptameric sap-like pentraxin2 from limulus polyphemus Resolution 2.30 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	G	C	Y	S	L	T	F	N	V	D	E	S	W	L	Q	E	G	Q	T	R	I	I	F	D	G	V	N	S	A	F	H	L	W	C	N	G	R	W	V	G	Y	G	Q	D	S	R	L	P	S	E	F	D	L	S	A	F	L	R	A	G	E	N
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		S	N	K	Y	I	S	C	P	I	E	I	E	L	G	Q	W	.	.	.	Y	H	V	C	H	V	W	S	G	V	D	G	R	M	A	V	Y	A	N	G	S	P	C	G	T	M	E	N	V	G	K	G	H	Q	I	S	A	G	G	T	V	V	I	G	Q	E
Template Known Secondary structure														T	T	S		.	.	.									T	T	T	T							T	T							S		S	S	T	T			B		S		B					S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions