Return to main results Retrieve Phyre Job Id

Job DescriptionP00722
Confidence95.52%DateThu Jan 5 10:56:50 GMT 2012
Rank151Aligned Residues230
% Identity16%Templatec3f55A_
PDB info PDB header:hydrolase, allergenChain: A: PDB Molecule:beta-1,3-glucanase; PDBTitle: crystal structure of the native endo beta-1,3-glucanase (hev b 2), a2 major allergen from hevea brasiliensis (space group p41)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360...... ...370.........380.........390.........400.........410.........420.........430..
Predicted Secondary structure 









.
































Query SS confidence 












.

































































Query Sequence  GVNRHEHHPLHGQ. VMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPR
Query Conservation 


 
   
  
 .    
    

 


  
 
 

 



    






 

 
 


  
 

          
 
Alig confidence 



....




.






...













..































........
Template Conservation 

 
....
    




  
...
 



 

  


..
 

  

 
   


 
 


 
  
   
 ........
Template Sequence  GVCY. . . . GMQGNNLPPVSEV. . . IALYKKSNITRMRI. . YDPNQAVLEALRGSNIELILGVPNSDLQSLTN. . . . . . . .
Template Known Secondary structure 
....



SS


...T


..SS

TTT



TTTTTGGGS........
Template Predicted Secondary structure  ....








...



..















........
Template SS confidence 















































































   3... ...10......... 20.........30... ......40.........50.........60.....
 
   433......440.........450.........460...... ...470.........480... ......490........
Predicted Secondary structure 










............



..








Query SS confidence 

































. . . . . . . . . . . .
















. .














Query Sequence  WLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG. . . . . . . . . . . . ANHDALYRWIKSVDPSR. . PVQYEGGGADTTATD
Query Conservation             

 








 






  
............ 
        
  



..

 

         
Alig confidence  .
































............
















..


......





Template Conservation  .   
  

   
        
  
 





            

 

  
  

   

   



......
     
Template Sequence  . PSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVS. . . . . . TAIDLT
Template Known Secondary structure  .TTTTTTTTTS

SSSTTTTTTT
TTTS......
SS
Template Predicted Secondary structure  .























......
Template SS confidence 















































































   66...70.........80.........90.........100.........110.........120.........130.. ......
 
   499500...... ...510.........520........
Predicted Secondary structure 




...................











...............................
Query SS confidence 







. . . . . . . . . . . . . . . . . . .





















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  IICPMYAR. . . . . . . . . . . . . . . . . . . VDEDQPFPAVPKWSIKKWLSLP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 
 

  ...................                      ...............................
Alig confidence 







...................





















...............................
Template Conservation        


   
         
 
 

    
   

 



        
 
 



        
    
 
 


 
Template Sequence  LVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDAT
Template Known Secondary structure  S
SSGGG

GGGTT




TTTS
TT

SS
STT
S
Template Predicted Secondary structure 












































Template SS confidence 















































































   139140.........150.........160.........170.........180.........190.........200.........210........
 
   529530.........540. ........550.........560.........570.........580.........590.....
Predicted Secondary structure  ............






.






















Query SS confidence  . . . . . . . . . . . .












.





















































Query Sequence  . . . . . . . . . . . . GETRPLILCEYAH. AMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGD
Query Conservation  ............   

 
  

 
.



  
 
  

          




   
         
     






Alig confidence  ............












.

















........



























Template Conservation   

   
          









 
   

  

  
   ........

     


      
   

  


 
Template Sequence  LDALYSALERASGGSLEVVVSESGWPSAGAFAATFDNGRTYLSN. . . . . . . . LIQHVKRGTPKRPKRAIETYLFAMFDEN
Template Known Secondary structure  TTT
TT




SSSSTT

........TTS

SSS
SS



SB

T
Template Predicted Secondary structure 
















........














Template SS confidence 















































































   219220.........230.........240.........250.........260.. .......270.........280.........290
 
   596...600.........610.....
Predicted Secondary structure 
















Query SS confidence 



















Query Sequence  TPNDRQFCMNGLVFADRTPH
Query Conservation   
 
 

   


  

 

Alig confidence 



















Template Conservation 

    
  



  
   
Template Sequence  KKQPEVEKHFGLFFPNKWQK
Template Known Secondary structure  TSSSGGGG


SB
TTS
BS
Template Predicted Secondary structure 












Template SS confidence 



















   291........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions