Job Description P00722 Confidence 99.72% Date Thu Jan 5 10:56:50 GMT 2012 Rank 50 Aligned Residues 272 % Identity 13% Template c3d3aA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of a beta-galactosidase from bacteroides2 thetaiotaomicron Resolution 2.15 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390						.	.	.	.	.	.												.
Predicted Secondary structure																																																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	V	R	I	E	N	G	L	L	L	L	N	G	K	P	L	L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	S	H	Y	P	N	H	.	.	.	.	.	.	.	.	.	.	.	P
Query Conservation																																																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																									.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		G	T	F	E	V	G	K	N	T	F	L	L	N	G	E	P	F	V	V	K	A	A	E	I	H	Y	P	.	.	.	.	.	.	R	I	P	K	E	Y	W	E	H	R	I	K	X	C	K	A	L	G	X	N	T	I	C	L	Y	V	F	W	N	F	H	E	P	E	E	G	R	Y	D	F	A	G	Q	K	D	I	A
Template Known Secondary structure								S	S	S				T	T												G	G	.	.	.	.	.	.	G	S		G	G	G												T															S	S	T	T					S	G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.														.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	.	.	.	.	.	D	R	N	H	P	S	V	I	I	W	S	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		A	F	C	R	L	A	Q	E	N	G	X	Y	V	I	V	R	P	G	P	Y	V	C	A	E	W	E	X	G	G	L	P	W	W	L	L	K	K	K	D	I	K	L	R	E	Q	D	P	Y	Y	X	E	R	V	K	L	F	L	N	E	V	G	K	Q	L	A	D	L	Q	I	S	K	G	G	N	I	I	X	V	Q	V
Template Known Secondary structure										T	T									S				T	T	B	G	G	G	G			G	G	G	G	G	S	T	T			S	S	S																					G	G	G	B	G	G	G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		460	.	.					.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		G	N	E	.	.	.	.	S	G	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																																		.	.	.
Template Conservation																																																										.	.	.
Template Sequence		E	N	E	Y	G	A	F	G	I	D	K	P	Y	I	S	E	I	R	D	X	V	K	Q	A	G	F	T	G	V	P	L	F	Q	C	D	W	N	S	N	F	E	N	N	A	L	D	D	L	L	W	T	I	N	F	G	T	.	.	.	G	A	N	I	D	E	Q	F	K	R	L	K	E	L	R	P	D	T	P	L	X
Template Known Secondary structure		S	S		G	G	G	T																		T			S	S								T	T	T	G	G	G	T			T	T	S								T	.	.	.	T															T	T	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600											.	.	.
Predicted Secondary structure																																								.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	.	.	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	.	.	.	.	.	.	.	.	.	.	Q	F	C
Query Conservation																																								.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.													.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	S	E	F	W	S	G	W	F	D	H	W	G	A	.	.	.	.	.	.	.	.	.	.	.	.	K	H	E	T	R	S	A	E	E	L	V	K	G	X	K	E	X	L	D	R	N	I	S	F	S	L	Y	X	T	H	G	G	T	S	F	G	H	W	G	G	A	N	F	P	N	F	S	P	T	C	T	S	Y	D
Template Known Secondary structure								S				B	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.																			T	T	T								S	B			B			T	T		B				T	T	T	T			B		S	B
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270													.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	A	P	I	N	E	S	G	K	V	T	P	K	Y	L	E	V	R	N	L	L	G
Template Known Secondary structure		T	T		S	B		T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions