Job Description P00722 Confidence 98.92% Date Thu Jan 5 10:56:50 GMT 2012 Rank 87 Aligned Residues 183 % Identity 22% Template c2y8kA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:carbohydrate binding family 6; PDBTitle: structure of ctgh5-cbm6, an arabinoxylan-specific xylanase. Resolution 1.47 Å

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																			.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	K	P	L	L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	W	Y	T	L	C	D	R	Y	G
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		N	G	Q	P	L	R	G	P	Y	T	S	T	E	W	T	A	A	A	P	.	.	.	.	.	.	.	.	.	Y	D	Q	I	A	R	V	K	E	L	G	F	N	A	V	H	L	Y	A	E	C	F	D	P	R	Y	P	A	P	G	S	K	A	P	G	Y	A	V	N	E	I	D	K	I	V	E	R	T	R	E	L	G
Template Known Secondary structure		T	S		B									S	S	S					.	.	.	.	.	.	.	.	.					G	G	G	G	G	G	T													T	T	T	T	S	T	T				T	T	T	T															T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.																.	.	.	.	.	.	470	.
Predicted Secondary structure																												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	D	P	R	W	.	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	G	A	N	H	D	A
Query Conservation																												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.											.																							.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		L	Y	L	V	I	T	.	.	.	.	.	.	.	.	.	.	I	G	N	G	A	N	N	G	N	H	N	A	Q	W	A	R	D	F	W	K	F	Y	A	P	R	Y	A	K	E	T	H	V	L	.	Y	E	I	H	N	E	P	V	A	W	G	P	P	Y	S	S	S	T	A	N	P	P	G	A	V	D	M	E	I	D
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.				T	T		T	T																			T	T		T	T			.					S	S		S	S	S		S		T	T	S	T	T	S	S	S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		127	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.																												.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	R	I	I	R	T	Y	A	P	E	T	P	V	L	L	F	S	Y	A	V	F	G	G	K	G	G	A	A	E	A	L	K	D	I	R	A	F	N	K	A	V	F	G	N	E	N	A	V	W	T	N	E	A	V	A	F	H	G	Y	A	G	W	Q	E	T	T	I	A	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure											T	T	S								S																								S	S	T	T				S	S							S	T	T									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.											.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	.	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		E	E	L	L	K	A	G	Y	P	C	F	M	T	E	Y	A	G	G	G	S	G	M	G	G	L	D	V	E	L	T	Y	E	L	E	R
Template Known Secondary structure							T	T														S		S	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions