Job Description P00722 Confidence 96.91% Date Thu Jan 5 10:56:50 GMT 2012 Rank 122 Aligned Residues 164 % Identity 18% Template c2y2wC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:arabinofuranosidase; PDBTitle: elucidation of the substrate specificity and protein2 structure of abfb, a family 51 alpha-l-arabinofuranosidase3 from bifidobacterium longum. Resolution 2.50 Å

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		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390																													.	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	N	H	.	.	.	.	.	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.																					.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		Q	D	V	L	D	L	V	K	E	L	G	V	T	C	V	R	Y	P	G	G	N	F	V	S	N	Y	N	W	E	D	G	I	G	P	R	E	N	R	P	M	R	R	D	L	A	W	H	C	T	E	T	N	E	M	G	I	D	D	F	Y	R	W	S	Q	K	A	G	T	E	I	M	L	A	V	N	M	.	.	.	G
Template Known Secondary structure												T							S		S	G	G	G	G	G			G	G	G	G	S	S		G	G	G							T	T	T	T						S	S	S												T										.	.	.	S
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.				.	.	.	.	.	.	.	460	.	.	.	.													.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	.	.	.	S	V	I	I	W	S	L	G	N	E	S	G	.	.	.	.	.	.	.	.	.	.	.	.	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V
Query Conservation																																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	G	L	K	A	A	L	D	E	L	E	Y	V	N	G	A	P	G	T	A	W	A	D	Q	R	V	A	N	G	I	E	E	P	M	D	I	K	M	W	C	I	G	N	E	M	D	G	P	W	Q	V	G	H	M	S	P	E	E	Y	A	G	A	V	D	K	V	A	H	A	M	K	L	A	E	S	G	L	E	L
Template Known Secondary structure		S																	T	T	S									T	T			S										S	S				S	T	T	S	T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		486	.	.	.	490	.	.	.																	.	.	.	.	.	.	500	.	.	.	.	.																				.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	E	G	G	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	A	T	D	I	I	C	P	M	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	C	G	S	S	G	A	Y	M	P	T	F	G	T	W	E	K	T	V	L	T	K	A	Y	E	N	L	D	F	V	S	C	H	A	Y	Y	F	D	R	G	H	K	T	R	A	A	A	S	M	Q	D	F	L	A	S	S	E	D	M	T	K	F	I	A	T	V	S	D	A	A	D	Q	A	R	E	A	N	N	G
Template Known Secondary structure							S		T	T		T	T	T	T											G	G	G													T	T	T	T	T	T										T	T																							T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		531	.			.	.	.	.	.	.	.	540
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		T	R	.	.	P	L	I	L	C	E	Y	A
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		T	K	D	I	A	L	S	F	D	E	W	G
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions