Job Description P00722 Confidence 99.97% Date Thu Jan 5 10:56:50 GMT 2012 Rank 26 Aligned Residues 229 % Identity 16% Template c2w62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycolipid-anchored surface protein 2; PDBTitle: saccharomyces cerevisiae gas2p in complex with2 laminaripentaose Resolution 1.85 Å

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		335	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.				.	.	.	.	.	400	.	.	.
Predicted Secondary structure												.	.																								.	.	.	.	.	.																												.	.	.
Query SS confidence												.	.																								.	.	.	.	.	.																												.	.	.
Query Sequence		E	V	R	I	E	N	G	L	L	L	.	.	L	N	G	K	P	L	L	I	R	G	V	N	R	H	E	H	H	P	L	H	G	Q	V	.	.	.	.	.	.	M	D	E	Q	T	M	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	.	.	.	N	H	P	L	W	Y	T	L	C
Query Conservation												.	.																								.	.	.	.	.	.																												.	.	.
Alig confidence												.	.																								.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		A	I	K	I	V	G	N	K	F	F	D	S	E	S	G	E	Q	F	F	I	K	G	I	A	Y	Q	L	Q	R	S	G	A	F	E	T	S	Y	I	D	A	L	A	D	P	K	I	C	L	R	D	I	P	F	L	K	M	L	G	V	N	T	L	R	V	Y	A	I	D	P	T	K	S	H	D	I	C	M	E	A	L
Template Known Secondary structure							T	T					T	T	T			B																S	S		S	S			G	G	G																T		S					S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.												.	.	.	470	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	G	H	G	.	.	.	.	.	.	.	.	.	.	.	A	N	H	D	A	L
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		S	A	E	G	M	Y	V	L	L	D	L	.	.	.	.	.	S	E	P	D	I	S	I	N	R	E	N	P	S	W	D	V	H	I	F	E	R	Y	K	S	V	I	D	A	M	S	S	F	P	N	L	L	G	Y	F	A	G	N	E	V	T	N	D	H	T	N	T	F	A	S	P	F	V	K	A	A	I	R	D	A
Template Known Secondary structure				T	T							S	.	.	.	.	.		B	T	T	B	S			T	T	S																			T	T		T	T									S	S	S		S	T	T		G	G	G
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.														.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure												.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	W	I	K	S	V	D	P	S	.	R	P	V	Q	Y	E	G	G	G	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	T	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E
Query Conservation												.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.													.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																																	.	.
Template Sequence		K	E	Y	I	S	H	S	N	H	R	K	I	P	V	G	Y	S	T	N	D	D	A	M	T	R	D	N	L	A	R	Y	F	V	C	G	D	V	K	A	D	F	Y	G	I	N	M	Y	.	.	E	W	C	G	Y	S	T	Y	G	T	S	G	Y	R	E	R	T	K	E	F	E	G	Y	P	I	P	V	F	F	S	E
Template Known Secondary structure								S	S	S													T	T	T								T	T	B	T	T				S								.	.				S	S							S									T	T		S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R	Q	Y	.	.	P	R	L	Q	G	G	F	V	W	D	W
Query Conservation																								.	.
Alig confidence				.																				.	.
Template Conservation				.
Template Sequence		F	G	.	C	N	L	V	R	P	R	P	F	T	E	V	S	A	L	Y	G	N	K	M	S	S	V	W	S	G	G	L	A	Y	M	Y
Template Known Secondary structure				.			S	S	S	S				T						T	S					T	T							S		S
Template Predicted Secondary structure				.
Template SS confidence
		276	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions