Return to main results Retrieve Phyre Job Id

Job DescriptionP00722
Confidence22.25%DateThu Jan 5 10:56:50 GMT 2012
Rank262Aligned Residues90
% Identity14%Templatec2ragB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   530.........540. ........550... ......560.....
Predicted Secondary structure 





....







.

.......................................
Query SS confidence 











. . . .











.











. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  ETRPLILCEYAH. . . . AMGNSLGGFAKY. WQAFRQYPRLQG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation    

 
  

 
....



  
 
  
.
          
.......................................
Alig confidence 







...
....











.











.......................................
Template Conservation 
  




...


 


  
 


 

 




  





     
                                
Template Sequence  SKAPIIAS. . . HSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPEAPDMKTATPEAVKAYADKRAAIDKA
Template Known Secondary structure 
SS

...TTTS

TT
TT

SSSSS









TTTS
Template Predicted Secondary structure 


...





































Template SS confidence 















































































   242....... 250.........260.........270.........280.........290.........300.........310........
 
   566...570.........580.........590.........600.........610.........620.......
Predicted Secondary structure  .....































Query SS confidence  . . . . .





























































Query Sequence  . . . . . GFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQF
Query Conservation  .....



   
         
     






 
 
 

   


  

 


   
 
    
Alig confidence  .....



























.....




























Template Conservation       
 
     

  
  
 
 








.....

     

 
    
 
   
  



 
Template Sequence  HPAARGDFDLYMKSMLHVLKVAGPKGVCVGADW. . . . . DGGGGMDGFEDITDLPKITARLKAEGYSD
Template Known Secondary structure  S




B
TTS


T.....TTT

BBTBSSGGGTTT

Template Predicted Secondary structure 














.....














Template SS confidence 


































































   329330.........340.........350.........360. ........370.........380.........390
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions