Job Description P00722 Confidence 99.27% Date Thu Jan 5 10:56:50 GMT 2012 Rank 66 Aligned Residues 217 % Identity 17% Template c2jepB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xyloglucanase; PDBTitle: native family 5 xyloglucanase from paenibacillus pabuli Resolution 1.4 Å

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		353	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390												.	.	.	.	.	.	.	.								.	400	.	.	.	.	.	.	.
Predicted Secondary structure							.																	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence							.																	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		R	G	V	N	R	.	H	E	H	H	P	L	H	G	Q	V	M	D	E	Q	T	M	.	.	.	.	.	.	V	Q	D	I	L	L	M	K	Q	N	N	F	N	A	V	R	C	.	.	.	.	.	.	.	.	.	.	.	S	H	Y	P	N	H	P	L	.	.	.	.	.	.	.	W	Y	T	L	C	D	R	Y	G
Query Conservation							.																	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence							.																	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	W	N	L	G	N	Q	L	E	A	A	V	N	G	T	P	N	E	T	A	W	G	N	P	T	V	T	P	E	L	I	K	K	V	K	A	A	G	F	K	S	I	R	I	P	V	S	Y	L	N	N	I	G	S	A	P	N	Y	T	I	N	A	A	W	L	N	R	I	Q	Q	V	V	D	Y	A	Y	N	E	G
Template Known Secondary structure		S						S	S	T	T				T	T				T	T	T	T	S															T	T											G	G	G	B			T	T	T			B																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		408	.	410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.															.	.	.
Predicted Secondary structure									.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	V	V	D	E	A	.	.	.	.	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	G	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	H
Query Conservation									.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	V	I	I	N	I	H	G	D	G	Y	N	S	V	Q	G	G	W	L	L	V	N	G	G	N	Q	T	A	I	K	E	K	Y	K	K	V	W	Q	Q	I	A	T	K	F	S	N	Y	N	D	R	L	I	F	E	S	M	N	E	V	F	D	G	N	Y	G	N	P	N	S	A	Y	Y	T	N	L	N	A	Y	N
Template Known Secondary structure										G	G	G		T	T	S	T	T					T	T		S																				T	T	T			T	T							S	S				S			S	S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		470	.	.	.	.	.	.	.	.	.				480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.																									.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		D	A	L	Y	R	W	I	K	S	V	.	.	.	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	C	P	M	Y	A	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	.	.	.
Query Conservation												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		Q	I	F	V	D	T	V	R	Q	T	G	G	N	N	N	A	R	W	L	L	V	P	G	W	N	T	N	I	D	Y	T	V	G	N	Y	G	F	T	L	P	T	D	N	Y	R	S	S	A	I	P	S	S	Q	K	R	I	M	I	S	A	H	Y	Y	S	P	W	D	F	A	G	E	E	N	G	N	I	T	Q	W	G
Template Known Secondary structure											S	S	G	G	G	G	T	S							G	G	G							S	S	S	S							T	T	S		T	T	S		T	T													S					T		S	S	S	S			B		S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
																							520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.										550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	.	.	.	.	.	.	.	.	.	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																										.	.
Template Sequence		A	T	S	T	N	P	A	K	K	S	T	W	G	Q	E	D	Y	L	E	S	Q	F	K	S	M	Y	D	K	F	V	T	Q	G	Y	P	V	V	I	G	E	F	G	S	I	D	K	T	S	Y	D	S	S	N	N	V	Y	R	A	A	Y	A	K	A	V	T	A	K	A	K	K	Y	K	.	.	M	V	P	V	Y	W
Template Known Secondary structure		T	T		S		G	G	G	B		S	S		S															T	G	G	G	T														T	T	T		T	T																			T	T	.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.
		570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		362	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions