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Job DescriptionP00722
Confidence42.64%DateThu Jan 5 10:56:50 GMT 2012
Rank210Aligned Residues142
% Identity15%Templatec2ddxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-1,3-xylanase; PDBTitle: crystal structure of beta-1,3-xylanase from vibrio sp. ax-4
Resolution0.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   437..440.........450.........460........ .470.........480..... ....490.
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Query Sequence  MSERVTRMVQRDRNHPSVIIWSLGNESGHGAN. . . . . . . . . . HDALYRWIKSVDPSRPV. . . . . . . . . . . . . . . QYEGGG
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Template Sequence  YNANIDTLLNTLAGYDRPVYLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWW
Template Known Secondary structure  TTT
S
TSSTT
GGG


T
TTT



TTS
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GGG
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   492.......500.........510.........520.........530.........540.........550
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Query Sequence  ADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGF. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PGSEYVDWVGLSYFAPQDCNWDRVNEAAQFARSK. . . . . GKPLFLNEST. PQRYQVADLTYSADPAKGTNRQSKTSQQLW
Template Known Secondary structure 

GGG
SSSGGGGTT.....T


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TTTTTT
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TTT

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   171........180.........190.........200.... .....210.... .....220.........230.........240....
 
   551........560......... 570.........580....
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Query Sequence  . . . . AKYWQAFRQYPRLQGGFVW. . . DWVDQSLIKYDENGN
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Template Sequence  DEWFAPYFQFMSDNSDIVKGFTYINADWDSQWRWAAPYNEG
Template Known Secondary structure  TTTTT
S
GGGSGGG
TTTTT
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   245....250.........260.........270.........280.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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