Job Description P00722 Confidence 98.50% Date Thu Jan 5 10:56:50 GMT 2012 Rank 104 Aligned Residues 236 % Identity 15% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		371	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																								.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		Q	T	M	V	Q	D	I	L	L	M	.	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	N	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	.	.	.	.
Query Conservation												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		K	E	Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	F	T	Y	I	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F	G	F	M	P	K	A	L	A	S	G	D	Q
Template Known Secondary structure															S			S					S		T	T	S	T	T	T									T	T																					T	T										B		G	G	G	B	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
									423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.													.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																											.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																											.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	.	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	G	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S
Query Conservation		.	.	.	.	.	.	.																											.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																											.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	F	Y	W	K	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	K	Q	E	Y	F	K	L	Y	E	V	T	A	R	A	V	K	S	V	D	P	H
Template Known Secondary structure				T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G																					T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		483	.	.	.	.	.	.	490	.	.																.	.	.	.	.	.	.	500	.	.	.	.	.	.																.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	V	Q	Y	E	G	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	T	A	T	D	I	I	C	P	M	Y	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	V	G	G	P	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	F	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F	K	T	V	R	A	L	I	R	Q	S	P	F	P	H	L
Template Known Secondary structure											S	S		T													T	T													B		S		S				S	S						B																				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.								.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	.	.	.	.	.	.	.	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	N	P	V	H	D	T	A	L	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	V	D	S	F	S	Y	W	T	F	S	D	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	E	M	D	V	P	K	A	L	F	H	G	G	F	.	.	.	.
Template Known Secondary structure										S		S		T	T		G	G	G	G	S														G	G	G	T		S					S		S	B	S	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S		S	S	S	S	S			S	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320													.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	V	A	L	H	S	I	P	K	P	T	F	H	A	F	T
Template Known Secondary structure			S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions