Job Description P00722 Confidence 92.22% Date Thu Jan 5 10:56:50 GMT 2012 Rank 159 Aligned Residues 208 % Identity 16% Template c1us2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-beta-1,4-xylanase; PDBTitle: xylanase10c (mutant e385a) from cellvibrio japonicus in2 complex with xylopentaose Resolution 1.85 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.					420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																																	.	.	.	.	.
Query SS confidence																									.	.	.	.																																																	.	.	.	.	.
Query Sequence		P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	.	.	.	.	G	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	G	H	G	A	.	.	.	.	.
Query Conservation																									.	.	.	.																																																	.	.	.	.	.
Alig confidence																									.	.	.	.																																																	.	.	.	.	.
Template Conservation
Template Sequence		D	A	F	V	D	W	A	T	E	N	N	M	T	V	H	G	H	A	L	V	W	H	S	D	Y	Q	V	P	N	F	M	K	N	W	A	G	S	A	E	D	F	L	A	A	L	D	T	H	I	T	T	I	V	D	H	Y	E	A	K	G	N	L	V	S	W	D	V	V	N	A	A	I	D	D	N	S	P	A	N	F
Template Known Secondary structure											T	T													G	G	G	S						T			S																								T										S		B		S	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
																		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.																										.	.	500	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	I	C	P	M	Y	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	T	D	S	A	F	Y	V	K	S	G	N	S	S	V	Y	I	E	R	A	F	Q	T	A	R	A	A	D	P	A	V	I	L	Y	Y	N	D	Y	N	I	E	Q	N	N	A	K	T	T	K	M	V	D	M	V	K	D	F	Q	A	R	S	I	P	I	D	G	V	G	F	Q	M	H	V	C	M	N	Y	P	S
Template Known Secondary structure				T	T							T	T	S		S															T	T	S							S	S	T	T	S		S																T	T														S	S		S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.																						550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence								.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	N	I	S	A	.	.	.	.	.	.	.	.	.	.	A	M	K	K	V	V	D	L	G	L	L	V	K	I	T	E	L	D	V	A	V	N	Q	P	H	C	D	A	Y	P	A	N	K	I	N	P	L	T	E	A	A	Q	L	A	Q	K	K	R	Y	C	D	V	V	K	A	Y	L	D	T	V	P	V	N	Q
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.							T	T	T												S	S		T	T	S	T	T	T	T	T	T				S																								S		G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		476	.	.	.	480	.											.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
				565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q
Query Conservation		.	.
Alig confidence		.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	G	I	S	V	W	G	T	T	D	.	.	.	.	.	.	.	.	.	.	.	A	N	T	W	L	D	G	L	Y	R	E	Q	F	E	D	E	K	I	S	W	P	L	L	F	D	N	N	Y	N	D	K	P	A	L	R	G	F	A	D	A	L
Template Known Secondary structure								S		S	B	G	.	.	.	.	.	.	.	.	.	.	.	G	G							T	T	T	T	T	T	T							S	S	B		T	T	S		B
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.												.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions