Job Description P00722 Confidence 98.45% Date Thu Jan 5 10:56:50 GMT 2012 Rank 106 Aligned Residues 236 % Identity 13% Template c1uhvD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-xylosidase; PDBTitle: crystal structure of beta-d-xylosidase from2 thermoanaerobacterium saccharolyticum, a family 393 glycoside hydrolase Resolution 2.10 Å

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		371	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																								.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		Q	T	M	V	Q	D	I	L	L	M	.	K	Q	N	N	F	N	A	V	R	C	S	H	Y	P	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	W	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	.	.	.	.	.	.
Query Conservation												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	Y	I	E	T	L	K	Y	V	K	E	N	I	D	F	K	Y	I	R	G	H	G	L	L	C	D	D	V	G	I	Y	R	E	D	V	V	G	D	E	V	K	P	F	Y	N	F	T	Y	I	D	R	I	F	D	S	F	L	E	I	G	I	R	P	F	V	E	I	G	F	M	P	K	K	L	A	S	G	T	Q
Template Known Secondary structure													T	T	S								S		T	T	S	T	T	T	T								T	T																						T										B		G	G	G	B	S	S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
							421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.													.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure		.	.	.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	M	V	P	M	N	R	L	T	D	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	.	R	N	H	P	S	V	I	I	W	S	L	G	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	G	H	G	A	N	H	D	A	L	Y	R	W	I	K	S	V	D	P	S
Query Conservation		.	.	.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																													.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	F	Y	W	E	G	N	V	T	P	P	K	D	Y	E	K	W	S	D	L	V	K	A	V	L	H	H	F	I	S	R	Y	G	I	E	E	V	L	K	W	P	F	E	I	W	N	E	P	N	L	K	E	F	W	K	D	A	D	E	K	E	Y	F	K	L	Y	K	V	T	A	K	A	I	K	E	V	N	E	N
Template Known Secondary structure				T	T	T	T				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G																					T	T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		483	.	.	.	.	.	.	490	.	.																.	.	.	.	.	.	.	500	.	.	.	.	.															.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	V	Q	Y	E	G	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	T	A	T	D	I	I	C	P	M	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	V	G	G	P	A	I	C	G	G	A	D	Y	W	I	E	D	F	L	N	F	C	Y	E	E	N	V	P	V	D	F	V	S	R	H	A	Y	T	S	K	Q	G	E	Y	T	P	H	L	I	Y	Q	E	I	M	P	S	E	Y	M	L	N	E	F	K	T	V	R	E	I	I	K	N	S	H	F	P	N	L	P
Template Known Secondary structure		S									S	S		T												T	T	T				S									B							S	S						B																			T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.								.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	.	.	.	.	.	.	.	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P	W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		F	H	I	T	E	Y	N	T	S	Y	S	P	Q	N	P	V	H	D	T	P	F	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	V	D	S	F	S	Y	W	T	F	S	D	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	E	R	D	V	P	R	S	Q	F	H	G	G	F	.	.	.	.	G
Template Known Secondary structure									S		S		T	T		G	G	G	G	S																			S					S		S	B	S	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S			S	S		S			S	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.													320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.					.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	L	N	M	I	P	K	P	T	F	Y	T	F	K
Template Known Secondary structure		S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions