Job Description P00722 Confidence 93.88% Date Thu Jan 5 10:56:50 GMT 2012 Rank 156 Aligned Residues 262 % Identity 14% Template c1nofA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:xylanase; PDBTitle: the first crystallographic structure of a xylanase from2 glycosyl hydrolase family 5: implications for catalysis Resolution 1.42 Å

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		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.							400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.					430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																			.	.	.	.	.	.																															.	.	.	.																							.
Query SS confidence																			.	.	.	.	.	.																															.	.	.	.																							.
Query Sequence		N	N	F	N	A	V	R	C	S	H	Y	P	N	H	P	L	W	.	.	.	.	.	.	Y	T	L	C	D	R	Y	G	L	Y	V	V	D	E	A	N	I	E	T	H	G	M	V	P	M	N	R	L	T	D	.	.	.	.	D	P	R	W	L	P	A	M	S	E	R	V	T	R	M	V	Q	R	D	R	N	H	.
Query Conservation																			.	.	.	.	.	.																															.	.	.	.																							.
Alig confidence																			.	.	.	.	.	.																															.	.	.	.																							.
Template Conservation
Template Sequence		I	G	L	S	I	M	R	V	R	I	D	P	D	S	S	K	W	N	I	Q	L	P	S	A	R	Q	A	V	S	L	G	A	K	I	M	A	T	P	W	S	P	P	A	Y	M	K	S	N	N	S	L	I	N	G	G	R	L	L	P	A	N	Y	S	A	Y	T	S	H	L	L	D	F	S	K	Y	M	Q	T	N	G
Template Known Secondary structure													S	S	G	G	G	G	G	G	G										T	T								S				G	G	G	B	T	T	S	S	S	B	S			B	B		G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
			452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.								470	.	.	.	.	.	.	.	.					.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.														.	.	.	500	.	.	.		.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence		.																			.	.	.	.	.	.	.										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		.	P	S	V	I	I	W	S	L	G	N	E	S	G	H	G	A	N	H	.	.	.	.	.	.	.	D	A	L	Y	R	W	I	K	S	.	.	.	.	V	D	P	S	R	P	V	Q	Y	E	G	G	G	A	D	T	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	I	I	C	P	M	.	Y	A
Query Conservation		.																			.	.	.	.	.	.	.										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.		.																	.	.	.	.	.	.	.										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation				.
Template Sequence		A	P	.	L	Y	A	I	S	I	Q	N	E	P	D	W	K	P	D	Y	E	S	C	E	W	S	G	D	E	F	K	S	Y	L	K	S	Q	G	S	K	F	G	S	L	K	V	I	V	A	E	S	L	G	F	N	P	A	L	T	D	P	V	L	K	D	S	D	A	S	K	Y	V	S	I	I	G	G	H	L	Y	G
Template Known Secondary structure				.		S				S		S		T	T				S	S	B			B														G	G	G	G	T	T	S								T	T			G	G	G	T					T						T	T									T	T
Template Predicted Secondary structure				.
Template SS confidence
		155	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	E	D	Q	P	F	P	A	V	P	K	W	S	I	K	K	W	L	S	L	P	G	E	T	R	P	L	I	L	C	E	Y	A	H	A	M	G	N	S	L	G	G	F	A	K	Y	W	Q	A	F	R	Q	Y	P	R	L	Q	G	G	F	V	W	D	W	V	D	Q	S	L	I	K	Y	D	E	N	G	N	P
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	P	K	P	Y	P	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	G	K	Q	L	W	M	T	E	H	Y	V	D	S	K	Q	S	A	N	N	W	T	S	A	I	E	V	G	T	E	L	N	A	S	M	V	S	N	Y	S	A	Y	V	W	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										S		T	T	S		T	T																		T	T							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.														.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																					.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	S	A	Y	G	G	D	F	G	D	T	P	N	D	R	Q	F	C	M	N	G	L	V	F	A	D	R	T	P	H	P	A	L	T	E	A	K	H	Q	Q	Q	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	R	L	S	G	Q	T	I	E	V	T	S	E	Y	L	F
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	W	Y	I	R	R	S	Y	G	L	L	T	E	D	G	K	V	S	K	R	G	Y	V	M	S	Q	Y	A	R	F	V	R	P	G	A	L	R	I	Q	A	T	E	N	P	Q	S	N	V	H	L	T	A	Y	K	N	T	D	G	K	M	V	I	V	A	V	N	T	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			S	B	S	T	T	S	S	B		T	T	S		B												T	T	S		T	T								S		S	B	T	T									T	T	S										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		646	.	.	.	650	.	.	.	.	.	.																				.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	S	D	N	E	L	L	H	W	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	D	G	K	P	L	A	S	G	E	V	P	L	D	V	A	P	Q	G	K	Q	L	I	E	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	D	Q	M	L	S	L	N	I	S	N	A	N	V	T	K	F	E	K	Y	S	T	S	A	S	L	N	V	E	Y	G	G	S	S	Q	V	D	S	S	G	K	A	T	V	W	L	N	P	L	S	V	T	T	F	V	S
Template Known Secondary structure		S	S										S												S	S	S		S	S										T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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