Job Description P00722 Confidence 84.05% Date Thu Jan 5 10:56:50 GMT 2012 Rank 171 Aligned Residues 113 % Identity 17% Template c1nkgA_ PDB info PDB header:lyase Chain: A: PDB Molecule:rhamnogalacturonase b; PDBTitle: rhamnogalacturonan lyase from aspergillus aculeatus Resolution 1.50 Å

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		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.				.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		I	P	H	L	T	T	S	E	M	D	F	C	I	E	L	G	N	.	.	.	K	R	W	Q	F	N	R	Q	S	G	F	L	S	Q	M	W	I	G	D	K	K	Q	L	L	T	P	L	R	D	Q	F	T	R	A	P	L	D	N	D	I	G	V	S	E	A	T	R	I	D	P	N	A	W	V	E	R	W	K	A	A
Query Conservation																			.	.	.
Alig confidence																			.	.	.																																.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	G	I	T	T	S	S	S	A	Y	V	I	D	T	N	A	P	N	Q	L	K	F	T	V	S	R	S	S	C	D	I	T	S	I	I	H	Y	G	T	E	L	Q	Y	S	S	Q	G	S	H	I	.	.	.	.	.	.	.	G	S	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S									T	T								T	T	T									T	T				B		S	S	S		B			.	.	.	.	.	.	.	T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.
		815	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	Y	Q	A	E	A	A	L	L	Q	C	T	A	D	T	L	A	D	A	V	L	I	T	T	A	H	A	W	Q	H	Q	G	K	T	L	F	I	S	R	K	T	Y	R	I	D	G	S	G	Q	M	A	I	T	V	D	V	E	V	A	S	D	T	P	H	P	A	R	I	G	L	N	C	Q	L	A	Q	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	S	A	T	V	T	A	T	Q	S	G	D	Y	I	K	V	T	C	V	T	D	T	L	T	.	.	.	.	.	.	.	.	.	.	Q	Y	M	V	V	H	N	G	D	P	I	I	H	M	A	T	.	Y	I	T	A	E	P	S	I	G	E	L	R	F	I	A	R	L	N	S	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	S									T	T									S	S			.	.	.	.	.	.	.	.	.	.							T	T									.			S	S			T	T	S										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
										57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.											80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions