 |
Job Description | P0AG55 | Confidence | 99.67% | Date | Thu Jan 5 11:28:10 GMT 2012 |
Rank | 22 | Aligned Residues | 87 |
% Identity | 22% | Template | d1vqoe2 |
SCOP info | Ribosomal protein L6
| Ribosomal protein L6
| Ribosomal protein L6
|
Resolution | 2.20 |
|
 |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | T | K | K | L | Q | L | V | G | V | G | Y | R | A | A | V | K | G | N | . |
. |
. |
. |
V | I | N | L | S | L | G | F | S | H | P | V | D | H | Q | L | P | A | G | I | T | A | E | C | P | T | Q | T | E | I | V | L | K | G | A | D | K | Q | V | I | G | Q | V | A | A | D | L | R | A | Y | R | R | P | E | P | Y | K |
Query Conservation |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   | . | . | . | . |   |
|   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   | . |   |
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|
|
|   |
|   |   |
|
|   |
| . | . | . |
|
Template Sequence |   |
W | E | Y | G | M | E | V | F | Y | S | H | F | P | M | Q | V | N | V | E | G | D | E | V | V | I | E | N | F | L | G | E | K | A | P | R | R | T | T | I | H | G | D | T | D | V | E | I | . |
D | G | E | E | L | T | V | S | G | P | D | I | E | A | V | G | Q | T | A | A | D | I | E | Q | L | T | R | I | . |
. |
. |
N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  | T | T |  |  |  |  |  | S | G | G | G |
| S | S |
|  |  |  |  |
|
| T | T |
|  |  |  |  | . |  | T | T |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
. |
  |
  |   |
159 | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . |  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | G | . |
. |
V | R | Y | A | D | E | V | V | R | T | K | E |
Query Conservation |   |
|
|
| . | . |
|   |   |   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|
|
|
|
|
|
|   |   |
|   |
Template Sequence |   |
D | K | D | V | R | V | F | Q | D | G | V | Y | I | T | R | K | P |
Template Known Secondary structure |   |
S | S |
| T | T | T |
|
|
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|