Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG55
Confidence4.01%DateThu Jan 5 11:28:10 GMT 2012
Rank89Aligned Residues32
% Identity9%Templated1rhi3_
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4)
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90....
Predicted Secondary structure 




Query SS confidence 































Query Sequence  AQAGTARALLNSMVIGVTEGFTKKLQLVGVGY
Query Conservation 
  

 



 


 


 

   
 





Alig confidence 































Template Conservation      
 
  

  
  




  

   

  
Template Sequence  VFKTTLLGEIAQYYTHWSGSLRISLMYTGPAL
Template Known Secondary structure  GGTTSTTS

S
TT
Template Predicted Secondary structure 











Template SS confidence 































   91........100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions