Job Description P0AG55 Confidence 6.26% Date Thu Jan 5 11:28:10 GMT 2012 Rank 51 Aligned Residues 55 % Identity 16% Template d1fpn3_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 2.60

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	T	T	L	I	G	E	I	S	S	Y	F	T	H	W	T	G	S	L	R	F	S	F	M	F	C	G	T	A	N	T	T	V	K	L	L	L	A	Y	T	P	P	G	I	A	E	P	T	T	R	K	D	A	M	L	G	T	H	V	I	W	D	V	G	L	Q	S	T	I	S	M	V	V	P
Template Known Secondary structure		G	G	G	S							T	T						S										S		T	T		B										S	S	S				S	S						T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions