Job Description P0AG55 Confidence 100.00% Date Thu Jan 5 11:28:10 GMT 2012 Rank 9 Aligned Residues 170 % Identity 21% Template c4a1eE_ PDB info PDB header:ribosome Chain: E: PDB Molecule:60s ribosomal protein l9; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1 Resolution 3.52 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.																																.	.
Query SS confidence									.																																.	.
Query Sequence		M	S	R	V	A	K	A	.	P	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	.	.	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I
Query Conservation									.																																.	.
Alig confidence									.																																.	.
Template Conservation
Template Sequence		M	R	H	L	L	T	E	V	N	V	P	I	P	D	K	V	T	I	T	A	K	Q	R	V	V	E	V	K	G	P	L	G	T	I	K	R	A	F	R	Y	A	S	V	D	I	Q	K	P	T	A	D	N	V	K	L	Q	I	W	Q	A	S	R	K	E	R	A	V	L	Q	S	I	A	S	Q	I	K	N	M	I	R
Template Known Secondary structure															T	T							T	T							T	T								T	T	S								B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.									.	.																				.	.
Query SS confidence																							.	.	.	.									.	.																				.	.
Query Sequence		G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	.	.	.	.	K	G	N	V	I	N	L	S	.	.	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	.	.	P	T	Q	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L	R
Query Conservation																							.	.	.	.									.	.																				.	.
Alig confidence																							.	.	.	.									.	.																				.	.
Template Conservation
Template Sequence		G	V	T	E	G	Y	K	F	K	M	K	L	A	F	A	H	F	P	I	Q	E	A	V	A	K	D	G	S	S	I	E	I	K	H	F	L	G	E	K	R	I	R	R	I	Q	A	L	P	G	V	K	I	S	R	K	D	E	E	K	N	T	L	T	L	Q	G	I	D	L	N	N	V	S	Q	T	C	A	L	I	H
Template Known Secondary structure					S											S	S	S								S	S	S								G	G	G											T	T							T	T	S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		A	Y	R	R	P	E	P	Y	K	G	K	G	V	R	.	.	Y	A	D	E	V	V	R	T	K	E
Query Conservation																.	.
Alig confidence						.	.	.								.	.
Template Conservation						.	.	.
Template Sequence		Q	S	C	L	.	.	.	V	K	E	K	D	I	R	Q	F	L	D	G	I	Y	V	S	D	K	R
Template Known Secondary structure				T		.	.	.			S	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		161	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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