Job Description P0AG55 Confidence 100.00% Date Thu Jan 5 11:28:10 GMT 2012 Rank 5 Aligned Residues 164 % Identity 48% Template c487dJ_ PDB info PDB header:ribosome Chain: J: PDB Molecule:protein (50s l6 ribosomal protein); PDBTitle: seven ribosomal proteins fitted to a cryo-electron2 microscopic map of the large 50s subunit at 7.5 angstroms3 resolution Resolution 7.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	E	I	P	A	G	V	T	V	T	V	N	G	N	T	V	T	V	K	G	P	K	G	E	L	T	R	T	F	H	P	D	M	T	I	T	V	E	G	N	V	I	T	V	T	R	P	S	D	E	K	H	H	R	A	L	H	G	T	T	R	S	L	L	A	N	M	V	E	G	V	S	K	G	Y	E	K	A	L
Template Known Secondary structure							T	T							T	T							T	T									T	T							T	T							S			S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	G	V	G	Y	R	A	A	V	K	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	P	T	Q	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L	R	A	Y	R	R	P	E	P	Y	K	G	K	G	V	R	Y	A	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	V	G	V	G	Y	R	A	S	K	Q	G	K	K	L	V	L	S	V	G	Y	S	H	P	V	E	I	E	P	E	E	G	L	E	I	E	V	P	S	Q	T	K	I	I	V	K	G	A	D	K	Q	R	V	G	E	L	A	A	N	I	R	A	V	R	P	P	E	P	Y	K	G	K	G	I	R	Y	E	G	E
Template Known Secondary structure					S	T	T							T	T						S	S	S	S	S								T	T								T	T							S														T	T	S				T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		168	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions