Job Description P0AG55 Confidence 17.19% Date Thu Jan 5 11:28:10 GMT 2012 Rank 31 Aligned Residues 94 % Identity 11% Template c3pgeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:sumo-modified proliferating cell nuclear antigen; PDBTitle: structure of sumoylated pcna Resolution 2.80 Å

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		15	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		V	D	V	K	I	N	.	.	.	.	.	.	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L	Q
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																															.	.	.	.	.
Template Conservation																																																												.	.	.	.	.
Template Sequence		I	E	A	H	R	E	Q	I	G	G	G	E	T	I	K	F	V	A	D	G	D	I	G	S	G	S	V	I	I	K	P	F	V	D	M	E	H	P	E	T	S	I	K	L	E	M	D	Q	P	V	D	L	T	F	G	A	K	Y	.	.	.	.	.	L	L	D	I	I	K	G	S	S	L	S	D	R	V	G	I	R
Template Known Secondary structure									S													S	S										B			S	S	S		T	T		B					S	S											.	.	.	.	.					G	G	G	G	G	G		S
Template Predicted Secondary structure																																																												.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	V	G	Y	R	A	A	V	K	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P	A
Query Conservation
Alig confidence			.										.	.	.	.	.
Template Conservation			.										.	.	.	.	.
Template Sequence		L	.	S	S	E	A	P	A	L	F	Q	.	.	.	.	.	F	D	L	K	S	G	F	L	Q	F	F	L	A	P	K
Template Known Secondary structure			.		S	S	S						.	.	.	.	.				T	T
Template Predicted Secondary structure			.										.	.	.	.	.
Template SS confidence
		165		.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions