Job Description P0AG55 Confidence 100.00% Date Thu Jan 5 11:28:10 GMT 2012 Rank 10 Aligned Residues 169 % Identity 24% Template c3iz5F_ PDB info PDB header:ribosome Chain: F: PDB Molecule:60s ribosomal protein l9 (l6p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.																																.	.	.
Query SS confidence										.																																.	.	.
Query Sequence		M	S	R	V	A	K	A	P	.	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	.	.	.	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V
Query Conservation										.																																.	.	.
Alig confidence										.																																.	.	.
Template Conservation
Template Sequence		M	K	T	I	L	A	S	E	T	M	E	I	P	E	G	V	T	V	Q	V	A	A	K	V	V	T	V	E	G	P	R	G	K	L	T	R	N	F	K	H	L	N	L	D	F	Q	L	L	E	G	G	R	K	L	Q	V	D	A	W	F	G	T	R	R	T	M	A	A	I	R	T	A	I	S	H	V	Q	N	L	I
Template Known Secondary structure															T	T							T	T							T	T										T	T							T	T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.													.	.	.	.																							.	.
Query SS confidence																				.	.													.	.	.	.																							.	.
Query Sequence		I	G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	.	.	R	A	A	V	K	G	N	V	I	N	L	S	.	.	.	.	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	P	T	Q	.	.	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L
Query Conservation																				.	.													.	.	.	.																							.	.
Alig confidence																				.	.													.	.	.	.																							.	.
Template Conservation
Template Sequence		T	G	V	T	K	G	Y	R	Y	K	M	R	F	V	Y	A	H	F	P	I	N	A	S	I	T	N	S	N	T	A	I	E	I	R	N	F	L	G	E	K	K	V	R	K	V	D	M	L	E	G	V	T	I	L	R	S	E	K	V	K	D	E	L	V	L	D	G	N	D	I	E	L	V	S	R	S	A	A	L	I
Template Known Secondary structure						T											S	S	S								T	T	T	T						S	G	G	G		S	S								S	S								T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		R	A	Y	R	R	P	E	P	Y	K	G	K	G	V	R	.	.	Y	A	D	E	V	V	R	T	K
Query Conservation																	.	.
Alig confidence							.	.	.								.	.
Template Conservation							.	.	.
Template Sequence		N	Q	K	C	H	.	.	.	V	K	N	K	D	I	R	K	F	L	D	G	I	Y	V	S	D	K
Template Known Secondary structure					T		.	.	.			S	S		T	T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		161	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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