Job Description P0AG55 Confidence 6.22% Date Thu Jan 5 11:28:10 GMT 2012 Rank 52 Aligned Residues 55 % Identity 11% Template c3cjiB_ PDB info PDB header:virus Chain: B: PDB Molecule:polyprotein; PDBTitle: structure of seneca valley virus-001 Resolution 2.30 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	N	T	L	V	G	A	I	S	S	N	F	A	N	Y	R	G	C	I	Q	I	T	L	T	F	C	G	P	M	M	A	R	G	K	F	L	L	S	Y	S	P	P	N	G	T	Q	P	Q	T	L	S	E	A	M	Q	C	T	Y	S	I	W	D	I	G	L	N	S	S	W	T	F	V	V	P
Template Known Secondary structure		T	T	T	S							T	T						S										S		T	T														S	S				S					T	T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions