Job Description P0AG55 Confidence 8.38% Date Thu Jan 5 11:28:10 GMT 2012 Rank 49 Aligned Residues 55 % Identity 11% Template c2wzr3_ PDB info PDB header:virus Chain: 3: PDB Molecule:polyprotein; PDB Fragment:residues 285-503; PDBTitle: the structure of foot and mouth disease virus serotype sat1 Resolution 3.00 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	N	T	Y	M	S	G	L	A	Q	Y	F	A	Q	Y	S	G	T	L	N	L	H	F	M	Y	T	G	P	T	N	N	K	A	K	Y	M	V	A	Y	I	P	P	G	T	H	P	L	P	E	T	P	E	M	A	S	H	C	Y	H	A	E	W	D	T	G	L	N	S	T	F	T	F	T	V	P
Template Known Secondary structure		T	T	T								T	T						S												T	T												T	T		S	S				S					T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions