Job Description P0AG55 Confidence 9.19% Date Thu Jan 5 11:28:10 GMT 2012 Rank 47 Aligned Residues 56 % Identity 18% Template c2wff3_ PDB info PDB header:virus Chain: 3: PDB Molecule:p1; PDB Fragment:capsid protein vp3, residues 311-536; PDBTitle: equine rhinitis a virus Resolution 4.00 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.																		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F	T	K	K	L	Q	L	V	G	V	G	Y	.	.	.	R	A	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P
Query Conservation																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	H	G	T	Y	V	A	S	L	S	S	F	F	A	Q	Y	R	G	S	L	N	F	N	F	I	F	T	G	A	A	A	T	K	A	K	F	L	V	A	F	V	P	P	H	S	A	A	P	K	T	R	D	E	A	M	A	C	I	H	A	V	W	D	V	G	L	N	S	A	F	S	F	N	V	P
Template Known Secondary structure		G	G	G	S	S							T	T																S		T	T												S	S	S	S				S					T	T	S								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions