Job Description P0AG55 Confidence 100.00% Date Thu Jan 5 11:28:10 GMT 2012 Rank 2 Aligned Residues 176 % Identity 100% Template c2i2vG_ PDB info PDB header:ribosome Chain: G: PDB Molecule:50s ribosomal protein l6; PDBTitle: crystal structure of ribosome with messenger rna and the2 anticodon stem-loop of p-site trna. this file contains the3 50s subunit of one 70s ribosome. the entire crystal4 structure contains two 70s ribosomes and is described in5 remark 400. Resolution 3.22 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	V	A	K	A	P	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	V	A	K	A	P	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E
Template Known Secondary structure			G	G	G	G							S	S							T	T							S	S									S	S				B		T	T	T	S		B					S	S		T	T	T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	P	T	Q	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L	R	A	Y	R	R	P	E	P	Y	K	G	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	P	T	Q	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L	R	A	Y	R	R	P	E	P	Y	K	G	K	G
Template Known Secondary structure											S	S	S							S	S	S	B				S	S		S	S				B				T	T	B			B		S	S	S	S			B			B	S														T	T	T				T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	Y	A	D	E	V	V	R	T	K	E	A	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	Y	A	D	E	V	V	R	T	K	E	A	K	K	K
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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