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Job DescriptionP0AG55
Confidence100.00%DateThu Jan 5 11:28:10 GMT 2012
Rank2Aligned Residues176
% Identity100%Templatec2i2vG_
PDB info PDB header:ribosomeChain: G: PDB Molecule:50s ribosomal protein l6; PDBTitle: crystal structure of ribosome with messenger rna and the2 anticodon stem-loop of p-site trna. this file contains the3 50s subunit of one 70s ribosome. the entire crystal4 structure contains two 70s ribosomes and is described in5 remark 400.
Resolution3.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTE
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Template Sequence  SRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTE
Template Known Secondary structure 
GGGG





SS


TT


SS







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B
TTTS
B



SS
TTTTTTT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKG
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Template Sequence  GFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKG
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SSS





SSSB


SS
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B


TTB

B
SSSSB

BS
TTT


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S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   162.......170.......
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Query Sequence  VRYADEVVRTKEAKKK
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Template Sequence  VRYADEVVRTKEAKKK
Template Known Secondary structure 
TT










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   161........170......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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