Job Description P0AG55 Confidence 100.00% Date Thu Jan 5 11:28:10 GMT 2012 Rank 3 Aligned Residues 172 % Identity 38% Template c2hguH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:50s ribosomal protein l6; PDBTitle: 70s t.th. ribosome functional complex with mrna and e- and p-site2 trnas at 4.5a. this entry 2hgu contains 50s ribosomal subunit. the3 30s ribosomal subunit can be found in pdb entry 2hgr. Resolution 4.51 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	A	P	V	V	V	P	A	G	V	D	V	K	I	N	G	Q	V	I	T	I	K	G	K	N	G	E	L	T	R	T	L	N	D	A	V	E	V	K	H	A	D	N	T	L	T	F	G	P	R	D	G	Y	A	D	G	W	A	Q	A	G	T	A	R	A	L	L	N	S	M	V	I	G	V	T	E	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	R	L	P	I	P	V	P	K	G	V	S	V	E	V	A	P	G	R	V	K	V	K	G	P	K	G	E	L	E	V	P	V	S	P	E	M	R	V	V	V	E	E	G	V	V	R	V	E	R	P	S	D	E	R	R	H	K	S	L	H	G	L	T	R	T	L	I	A	N	A	V	K	G	V	S	E	G	Y
Template Known Secondary structure				S							T	T							S	S						S	S	S									S	S							T	T							S			S																							S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	K	L	Q	L	V	G	V	G	Y	R	A	A	V	K	G	N	V	I	N	L	S	L	G	F	S	H	P	V	D	H	Q	L	P	A	G	I	T	A	E	C	P	T	Q	T	E	I	V	L	K	G	A	D	K	Q	V	I	G	Q	V	A	A	D	L	R	A	Y	R	R	P	E	P	Y	K	G	K	G	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	E	L	L	I	K	G	I	G	Y	R	A	R	L	V	G	R	A	L	E	L	T	V	G	F	S	H	P	V	V	V	E	P	P	E	G	I	T	F	E	V	P	E	P	T	R	V	R	V	S	G	I	D	K	Q	K	V	G	Q	V	A	A	N	I	R	A	I	R	K	P	S	A	Y	H	E	K	G	I	Y
Template Known Secondary structure										S	S		B					S	S					B	S	S	S	S									S	S						S	S	S	S	S	B					S	S														S	S				T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	D	E	V	V	R	T	K	E	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	G	E	P	V	R	L	K	P	G	K
Template Known Secondary structure		S	S		T	T							S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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