Job Description P06626 Confidence 95.50% Date Thu Jan 5 10:59:17 GMT 2012 Rank 20 Aligned Residues 171 % Identity 14% Template c3p7nB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis Resolution 2.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																				.	.	.																			.	.	.	.	.
Query SS confidence																				.	.	.																			.	.	.	.	.
Query Sequence		L	T	A	V	I	Q	D	Y	P	N	P	A	C	I	R	D	E	T	.	.	.	G	K	F	I	F	C	N	T	L	F	H	E	S	F	L	T	Q	D	.	.	.	.	.	Q	S	A	E	K	W	L	L	S	Q	R	D	F	C	E	L	I	S	V	T	E	M	E	A	Y	R	N	E	H	T	H	L	N	L	V	E
Query Conservation																				.	.	.																			.	.	.	.	.
Alig confidence																				.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		V	L	D	L	I	E	A	S	P	I	A	S	V	V	S	D	P	R	L	A	D	N	P	L	I	A	I	N	Q	A	F	T	D	L	T	G	Y	S	E	E	E	C	V	G	R	N	C	R	F	L	A	G	S	G	T	E	P	W	L	T	D	K	I	R	Q	G	V	R	E	H	K	P	V	L	V	E	I	L	N	Y
Template Known Secondary structure								T		S	S							T	T	S	T	T																						T	T	S		G	G	G	G	B		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	I	Q	N	R	F	W	T	I	S	V	Q	S	F	L	N	G	H	R	N	I	I	L	W	Q	F	Y	D	A	A	H	V	R	H	K	D	S	Y	N	Q	K	T	I	V	S	D	D	I	R	N	I	I	R	R	M	S	D	D	S	S	V	S	S	Y	V	N	D	V	F	Y	L	Y	S	T	G	I	S	H
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	D	G	T	P	F	R	N	A	V	L	V	A	P	I	Y	D	D	D	D	E	L	L	Y	F	L	G	S	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	G	M	A	R	R	E	R	A	A	E	M	L	K	T	L	S	P	R	Q	L	E	V	T	T	L	V	A	S	G	L	R	N
Template Known Secondary structure			T	T	S															T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S													T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	I	A	R	I	L	N	I	S	I	S	T	S	K	K	H	A	S	L	I	C	D	Y	F	S	V	S	N	K	D	E	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	V	A	A	R	L	G	L	S	E	K	T	V	K	M	H	R	G	L	V	M	E	K	L	N	L	K	T	S	A	D	L	V
Template Known Secondary structure									T																	T	T			S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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