Job Description P06626 Confidence 83.86% Date Thu Jan 5 10:59:17 GMT 2012 Rank 39 Aligned Residues 110 % Identity 11% Template c3lyxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:sensory box/ggdef domain protein; PDBTitle: crystal structure of the pas domain of the protein cps_12912 from colwellia psychrerythraea. northeast structural3 genomics consortium target id csr222b Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		D	L	L	E	N	L	T	A	V	I	Q	D	Y	P	N	P	A	C	I	R	D	E	T	G	K	F	I	F	C	N	T	L	F	H	E	S	F	L	T	Q	D	.	.	.	.	.	Q	S	A	E	K	W	L	L	S	Q	R	D	F	C	E	L	I	S	V	T	E	M	E	A	Y	R	N	E	H	T	H	L	N	L
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.
Template Conservation
Template Sequence		D	I	L	K	Q	R	A	K	A	F	D	Y	V	F	D	A	I	V	V	T	D	L	Q	G	F	I	I	D	W	N	K	G	S	E	T	L	Y	G	Y	S	K	E	Q	A	I	G	Q	P	V	N	M	L	H	V	P	G	D	T	E	H	I	T	S	E	V	I	S	A	V	E	N	Q	G	K	W	T	G	E	I	R
Template Known Secondary structure										G	G	G	T		S	S							T	T		B																				T	T	S	B	G	G	G	G	S		T	T	T															T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		V	E	D	V	F	I	Q	N	R	F	W	T	I	S	V	Q	S	F	L	.	.	N	G	H	R	N	I	I	L	W	Q	F	Y	D	A	A	H
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		M	L	H	K	D	G	H	I	G	W	I	E	S	M	C	V	P	I	Y	G	E	N	Y	Q	M	V	G	A	L	G	I	N	R	D	I	T	K
Template Known Secondary structure					T	T	S															S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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