 |
Job Description | P06626 | Confidence | 75.30% | Date | Thu Jan 5 10:59:17 GMT 2012 |
Rank | 56 | Aligned Residues | 47 |
% Identity | 19% | Template | c2r0qF_ |
PDB info |
PDB header:recombination/dna | Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; |
PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex
|
Resolution | 3.20 Å |
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | M | S | D | D | S | S | V | S | S | Y | V | N | D | V | F | Y | L | Y | S | T | G | I | S | H | N | A | I | A | R | I | L | N | I | S | I | S | T | S | K | K | H | A | S | L | I | C | D | Y | F | S |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   | . | . | . | . |
|   |   |
|
|   |
|   |   |   |   |   |
|
Template Sequence |   |
P | N | A | K | D | P | Q | K | R | V | I | Y | H | R | V | V | E | M | L | E | E | G | Q | A | I | S | K | I | A | K | E | V | N | I | . |
. |
. |
. |
T | R | Q | T | V | Y | R | I | K | H | D | N | G |
Template Known Secondary structure |   |
T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|