Job Description P06626 Confidence 81.35% Date Thu Jan 5 10:59:17 GMT 2012 Rank 46 Aligned Residues 116 % Identity 15% Template c2l4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2; PDBTitle: nmr solution structure of the n-terminal pas domain of herg Resolution UNK

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																				.	.	.	.	.
Query SS confidence																																				.	.	.																				.	.	.	.	.
Query Sequence		M	D	R	I	Q	Q	K	H	A	R	Q	I	D	L	L	E	N	L	T	A	V	I	Q	D	Y	P	N	P	A	C	I	R	D	E	.	.	.	T	G	K	F	I	F	C	N	T	L	F	H	E	S	F	L	T	Q	D	.	.	.	.	.	Q	S	A	E	K	W	L	L	S	Q	R	D	F	C	E	L	I	S	V
Query Conservation																																				.	.	.																				.	.	.	.	.
Alig confidence																																				.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		M	P	V	R	R	G	H	V	A	P	Q	N	T	F	L	D	T	I	I	R	K	F	E	G	Q	S	R	K	F	I	I	A	N	A	R	V	E	N	C	A	V	I	Y	C	N	D	G	F	C	E	L	C	G	Y	S	R	A	E	V	M	Q	R	P	C	T	C	D	F	L	H	G	P	R	T	Q	R	R	A	A	A
Template Known Secondary structure							S							S	S	T	T	T	T								S								T	T		S	S	S	S		S											T							T	T			T	T		G	G	G			T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		T	E	M	E	A	Y	R	N	E	H	T	H	L	N	L	V	E	D	V	F	I	Q	N	R	F	.	.	W	T	I	S	V	Q	S	F	L	N	G	H	R	N	I	I	L	W	Q
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		Q	I	A	Q	A	L	L	G	A	E	E	R	K	V	E	I	A	F	Y	R	K	D	G	S	C	F	L	C	L	V	D	V	V	P	V	K	N	E	D	G	A	V	I	M	F	I
Template Known Secondary structure										T		S										T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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