Return to main results Retrieve Phyre Job Id

Job DescriptionP06626
Confidence50.30%DateThu Jan 5 10:59:17 GMT 2012
Rank68Aligned Residues45
% Identity18%Templatec1u78A_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160 .........170.........180.........190........
Predicted Secondary structure 
.







Query SS confidence 










.





































Query Sequence  SDDSSVSSYVN. DVFYLYSTGISHNAIARILNISISTSKKHASLICDYFS
Query Conservation        
  
 . 

 

  
 

  

  
 
   


     
     
Alig confidence 










.


















....














Template Conservation 

   

   
  
  
   
 
   

  
....
 
  

   

   
Template Sequence  PRGSALSDTERAQLDVMKLLNVSLHEMSRKI. . . . SRSRHCIRVYLKDPV
Template Known Secondary structure 

S



TT

....T

SGG
Template Predicted Secondary structure 










....


Template SS confidence 

















































   2.......10.........20.........30.. .......40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions