Job Description P32716 Confidence 86.36% Date Thu Jan 5 11:50:38 GMT 2012 Rank 46 Aligned Residues 50 % Identity 18% Template c3nyyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative glycyl-glycine endopeptidase lytm; PDBTitle: crystal structure of a putative glycyl-glycine endopeptidase lytm2 (rumgna_02482) from ruminococcus gnavus atcc 29149 at 1.60 a3 resolution Resolution 1.60 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.												.	.	.	.	.							.
Query SS confidence															.	.	.	.	.	.	.	.												.	.	.	.	.							.
Query Sequence		V	D	S	A	P	S	T	N	D	A	Y	A	S	.	.	.	.	.	.	.	.	A	D	T	I	D	V	V	P	E	V	S	.	.	.	.	.	G	R	I	V	E	L	.	A	V	T	D	N	Q	A	V	K	Q	G	D	L	L	F	R	I	D	P	R
Query Conservation															.	.	.	.	.	.	.	.												.	.	.	.	.							.
Alig confidence															.	.	.	.	.	.	.	.												.	.	.	.	.							.
Template Conservation
Template Sequence		Y	Y	P	V	V	S	X	T	D	G	V	V	T	E	K	G	W	L	E	K	G	G	W	R	I	G	I	T	A	P	T	G	A	Y	F	Y	Y	A	H	L	D	S	Y	A	E	L	E	K	G	D	P	V	K	A	G	D	L	L	G	Y	X	G	D	S
Template Known Secondary structure			S					S	S											T	T	T									T	T	S									S				S			T	T					T	T							B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions