Job Description P32716 Confidence 25.23% Date Thu Jan 5 11:50:38 GMT 2012 Rank 124 Aligned Residues 75 % Identity 11% Template c2c35F_ PDB info PDB header:polymerase Chain: F: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: subunits rpb4 and rpb7 of human rna polymerase ii Resolution 2.70 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	M	S	D	S	G	K	T	F	E	G	K	V	D	S	I	G	Y	G	V	L	P	D	D	G	G	L	V	L	G	G	L	P	K	V	S	R	S	I	N	W	V	R	V	A	Q	R	F	P	V	K	I	M	V	D	K	P	D	P	E	M	F	R	I	G	A	S	A	V	A	N	L	E	P
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		I	V	F	R	P	F	K	G	E	V	V	D	A	V	V	T	Q	V	N	K	V	G	L	F	T	E	I	G	P	M	S	C	F	I	S	R	H	S	I	P	S	E	M	E	F	D	P	N	S	N	P	P	C	Y	K	T	M	D	E	D	.	I	V	I	Q	Q	D	D	E	I	R	L	K	I	V	G
Template Known Secondary structure								T	T												T	T							T	T							G	G	G	S		S	S					S	S	S	S	S						T	T	S	S	.					T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions