Job Description P32716 Confidence 21.72% Date Thu Jan 5 11:50:38 GMT 2012 Rank 133 Aligned Residues 73 % Identity 14% Template c2b8kG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: 12-subunit rna polymerase ii Resolution 4.15 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	M	S	D	S	G	K	T	F	E	G	K	V	D	S	I	G	Y	G	V	L	P	D	D	G	G	L	V	L	G	G	L	P	K	V	S	R	S	I	N	W	V	R	V	A	Q	R	F	P	V	K	I	M	V	D	K	P	D	P	E	M	F	R	I	G	A	S	A	V	A	N	L	E	P
Query Conservation
Alig confidence																																																									.	.	.
Template Conservation																																																									.	.	.
Template Sequence		V	V	F	K	P	F	K	G	E	V	V	D	G	T	V	V	S	C	S	Q	H	G	F	E	V	Q	V	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	G	S	N	P	P	S	Y	Q	.	.	.	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G
Template Known Secondary structure								T	T												T	T							T	T	S						G	G	G	S		S	S				B	S	S		S	S					.	.	.		S	S					T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions