Job Description P32716 Confidence 99.93% Date Thu Jan 5 11:50:38 GMT 2012 Rank 4 Aligned Residues 212 % Identity 26% Template c1t5eB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:multidrug resistance protein mexa; PDBTitle: the structure of mexa Resolution 3.00 Å

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		41	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		D	A	Y	A	S	A	.	D	T	I	D	V	V	P	E	V	S	G	R	I	V	E	L	A	V	T	D	N	Q	A	V	K	Q	G	D	L	L	F	R	I	D	P	R	P	Y	E	A	N	L	A	K	A	E	A	S	L	A	A	L	D	K	Q	I	M	L	T	Q	R	S	V	D	A	Q	Q	F	G	A	D	S	V
Query Conservation								.
Alig confidence								.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S								S	S									S		T	T					T	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	T	V	E	K	A	R	A	A	A	K	Q	A	T	D	T	L	R	R	T	E	P	L	L	K	E	G	F	V	S	A	E	D	V	D	R	A	R	T	A	Q	R	A	A	E	A	D	L	N	A	V	L	L	Q	A	Q	S	A	A	S	A	V	S	G	V	D	A	L	V	A	Q	R	A	A	V	E	A	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	T	K	L	H	L	E	M	A	T	V	R	A	P	F	D	G	R	V	I	S	L	K	T	S	V	G	Q	F	A	S	A	M	R	P	.	.	I	F	T	L	I	D	T	R	H	W	Y	V	I	A	N	F	R	E	T	D	L	K	N	I	R	S	G	T	P	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K
Template Known Secondary structure										T	T					S	S	S							S	S		T	T					T	T		S	S		S							S	S																					T	T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
			266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	I	R	L	M	S	D	S	G	K	T	F	E	G	K	V	D	S	I	G	Y	G	V	L	P	D	D	G	G	L	V	L	G	G	L	P	K	V	S	R	S	I	N	W	V	R	V	A	Q	R	F	P	V	K	I	M	V	D	K	P	D	P	E	M	F	R	I	G	A	S	A	V	A	N	L
Query Conservation		.
Alig confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	R	A	V	F	P	N	P	N	N	E	.	L	L	P	G	M	F	V	H	A	Q	L
Template Known Secondary structure							T	T	S												S						T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										G	G	G		.			T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																						.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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