 |
Job Description | P30855 | Confidence | 58.15% | Date | Thu Jan 5 11:46:34 GMT 2012 |
Rank | 500 | Aligned Residues | 71 |
% Identity | 18% | Template | d2tpsa_ |
SCOP info | TIM beta/alpha-barrel
| Thiamin phosphate synthase
| Thiamin phosphate synthase
|
Resolution | 1.25 |
|
 |
  |   |
986 | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | A | T | D | G | V | Q | A | L | H | K | V | S | M | Q | H | Y | D | L | L | I | T | . |
. |
. |
. |
. |
. |
. |
. |
D | V | N | M | P | N | M | D | G | F | E | L | T | R | K | L | R | E | Q | N | S | S | L | P | I | W | G | L | T | A | N | A | Q | A | N | E | R | E | K | G | L | S | C | G | M | N | L | C | L |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|   | . | . | . | . | . | . | . | . |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
| . |
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
| . |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
V | S | A | H | T | M | S | E | V | K | Q | A | E | E | D | G | . |
A | D | Y | V | G | L | G | P | I | Y | P | T | E | T | K | K | D | T | R | A | V | Q | G | V | S | L | I | E | A | V | R | R | Q | G | I | S | I | P | I | V | G | I | G | G | I | . |
T | I | D | N | A | A | P | V | I | Q | A | G | A | D | G | V | S |
Template Known Secondary structure |   |
 |  |  |
| S |  |  |  |  |  |  |  |  |  |  | T | . |
| S |  |  |  |  |
|
| S | S |
|
|
| S | S | S | S |
|
|
|
|
| T | T |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  | S | S |
| . |
| T | T | T | S |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |
  |   |
1058 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
F |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
M |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
207 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|