Job Description P30855 Confidence 97.11% Date Thu Jan 5 11:46:34 GMT 2012 Rank 330 Aligned Residues 203 % Identity 10% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		V	L	E	N	P	Y	S	P	P	Y	S	M	T	D	E	N	G	S	V	R	G	V	M	G	D	I	L	N	I	I	T	L	Q	T	G	L	N	F	S	P	I	T	V	S	H	N	I	H	A	G	T	Q	L	S	P	G	G	W	D	I	I	P	G	A	I	Y	S	E	.	.	.	.	.	.	.	D	R	E	N	N
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence							.	.						.	.	.	.	.															.	.	.																																			.	.	.	.	.	.	.
Template Conservation							.	.						.	.	.	.	.															.	.	.
Template Sequence		V	C	A	X	P	.	.	L	P	Y	T	R	.	.	.	.	.	L	Y	E	G	L	A	S	G	L	K	A	Q	F	D	.	.	.	G	I	P	F	Y	Y	A	H	X	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	X	A	V	V	S	R	L	A	A	E	S	Y	L	S	Q	N	N	L	C	I	A
Template Known Secondary structure							.	.				S		.	.	.	.	.												T	T	T	.	.	.	T	S								S											T	T	S		S																S
Template Predicted Secondary structure							.	.						.	.	.	.	.															.	.	.
Template SS confidence
		16	.	.	.	20			.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																																.												.
Query SS confidence																																																.												.
Query Sequence		V	L	F	A	E	A	F	I	T	T	P	Y	V	F	V	M	Q	K	A	P	D	S	E	Q	T	L	K	K	G	M	K	V	A	I	P	Y	Y	Y	E	L	H	S	Q	L	K	E	.	M	Y	P	E	V	E	W	I	Q	V	D	.	N	A	S	A	A	F	H	K	V	K	E	G	E	L	D	A	L	V	A	T	Q
Query Conservation																																																.												.
Alig confidence																										.	.	.	.	.																		.												.
Template Conservation																										.	.	.	.	.
Template Sequence		L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	G	N	V	.	.	.	.	.	K	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F	G	D	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V
Template Known Secondary structure						T	T	S	S	S									T	T		G	G	G		.	.	.	.	.							T	T													T	T	S																			T	S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	S	R	Y	M	I	D	H	Y	Y	P	N	E	L	Y	H	F	L	I	P	G	V	P	N	A	S	L	S	F	A	F	P	R	G	E	P	E	L	K	D	I	I	N	K	A	L	N	A	I	P	P	S	E	V	L	R	L	T	E	K	W	I	K	M	P	N	V	T	I	D
Query Conservation
Alig confidence																							.																											.	.	.
Template Conservation																							.																											.	.	.
Template Sequence		A	E	N	E	L	T	X	L	G	L	E	A	T	P	L	T	D	D	P	R	F	.	L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V	D	.	.	.	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G	E	Q	E	P	S	Y
Template Known Secondary structure									T	T								S					.			T	T								T	T														.	.	.													T	T	S	S
Template Predicted Secondary structure																							.																											.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions