Job Description P30855 Confidence 92.58% Date Thu Jan 5 11:46:34 GMT 2012 Rank 383 Aligned Residues 185 % Identity 14% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

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		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure															.																																																																.	.	.
Query SS confidence															.																																																																.	.	.
Query Sequence		I	N	A	D	Y	L	N	L	L	K	R	A	L	.	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	S	M	R	.	.	.
Query Conservation															.																																																																.	.	.
Alig confidence															.									.																			.	.	.																																		.	.	.
Template Conservation																								.																			.	.	.
Template Sequence		S	L	P	E	V	I	K	A	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	.	G	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	.	.	.	I	A	S	E	R	L	S	N	D	P	Q	L	V	A	F	P	W	F	R	W	H	H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S
Template Known Secondary structure		T													T	T								.													T	S		S			.	.	.			S	S	S	S	T	T		T	T																	T	T		G	G	G	T	S	S
Template Predicted Secondary structure																								.																			.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
				158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																			.	.	.	.	.																.
Query SS confidence		.	.																			.	.	.	.	.																.
Query Sequence		.	.	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	.	.	.	.	.	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	.	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N
Query Conservation		.	.																			.	.	.	.	.																.
Alig confidence		.	.																			.	.	.	.	.																.																							.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		P	L	T	L	E	S	I	A	K	W	P	L	I	T	Y	R	Q	G	I	T	G	R	S	R	I	D	D	A	F	A	R	K	G	L	L	A	D	I	V	L	S	A	Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	I	G	L	V	A	E	.	.	.	.	.	Q	S	S	G	E	Q	E	E	E	N	L	I
Template Known Secondary structure		S							T	T	S							T	T	S	T	T											T	T										S	S											T	S							G	.	.	.	.	.	G	G	G	S	T	T			T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	D	T	R	H	L	F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	Q	R	N	Y	V	W	R	F	L	E	L	C	N	A	G	L	S	V	E	D	I	K	R	Q
Template Known Secondary structure						T	T	T	S											T	T																S	S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions