Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence99.97%DateThu Jan 5 11:46:34 GMT 2012
Rank15Aligned Residues226
% Identity15%Templated2a5sa1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100..... ....110.........120.
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Query Sequence  LASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYAD. . . . . . . . . . HQKAMDALAEGEVDIV
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Template Sequence  VRNTVPCRKFV. KINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMA
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TT
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   33......40... ......50.........60.........70.........80.........90.........100.........110.
 
   122.......130.........140.........150.... .....160... ......170.........180..... ....190
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Query Sequence  LSHLVTSPPLNNDIAATKPLIITFPALVTTLHD. SMRPLTSPK. . . . . . PVNIARVANYPPDEVIHQSFPK. . . . ATIIS
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Template Sequence  VGSLTINEERSEVVDFSVPFVETGISVMVSRQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTRFN
Template Known Secondary structure 
SS
B

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STTSSGGGSSS




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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   191........200.........210.........220.........230.. .......240.........250.........260...... ..
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Query Sequence  FTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVK. YYNSPRQYNFFLTRKESVILNEVLNRFVDALTNE. VR
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Template Sequence  QRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSP. WKRQIDLALLQFVGDGEM
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   194.....200.........210.........220.........230.........240.........250.... .....260.........270..
 
   269270.........
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Query Sequence  YEVSQNWLDTG
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Template Sequence  EELETLWLTGI
Template Known Secondary structure  T


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   273......280...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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