Job Description P30855 Confidence 75.74% Date Thu Jan 5 11:46:34 GMT 2012 Rank 450 Aligned Residues 180 % Identity 11% Template d1vr5a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.73

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.						.	250	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	.	.	.	.	S	V	I	L	N	E	V	L
Query Conservation																																																																					.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	R	I	V	E	L	R	V	L	S	N	N	V	A	V	G	X	L	X	K	G	E	L	D	W	S	N	F	F	L	P	G	V	P	V	L	K	K	A	Y	G	I	V	T	W	Y	E	N	A	P	Y	X	L	P	A	N	T	A	G	I	Y	I	N	V	N	K	Y	P	L	S	I	P	E	F	R	R	A	X
Template Known Secondary structure				S								S												T	S						S			T	T								T			B		S	S	S	S	T	T		S												T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																						.	.	.	.	.	.	.	.	300	.	.	.								.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		N	R	F	V	D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	E	K	Q	W	I	K	Q	H	P	N	.	.	.	.	.	.	.	L	K	V	L	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		A	Y	A	I	.	.	.	.	.	.	N	P	E	K	I	V	T	R	A	Y	E	N	X	V	T	A	A	N	P	A	G	I	L	P	L	P	G	Y	X	K	Y	Y	P	K	E	V	V	D	K	Y	G	F	K	Y	D	P	E	X	A	K	K	I	L	D	E	L	G	F	K	D	V	N	K	D	G	F	R	E	D	P
Template Known Secondary structure						.	.	.	.	.	.									T	T	T	T	S	S					T	T				S	S					T	T													S												T	T		B			S	S	S	S	S		B		T
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		299	300	.	.							.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		N	P	Y	S	P	P	Y	S	M	T	D	E	N	G	S	V	R	G	.	V	M	G	D	I	L	N	I	I	T	L	Q	T	G	L	N	F	S	P	I	T	V	S	H	N	I	H	A	G	T	Q	L	S	P	G	G	W	D	I	I	P	G
Query Conservation																				.
Alig confidence																				.																								.
Template Conservation																																												.
Template Sequence		N	G	K	P	F	K	L	T	I	E	C	P	Y	G	W	T	D	W	X	V	S	I	Q	S	I	A	E	D	L	V	K	V	G	I	N	V	E	P	K	Y	P	D	.	Y	S	K	Y	A	D	D	L	Y	G	G	K	F	D	L	I	L	N
Template Known Secondary structure		T	S											T	T																	T	T	T										.											T			S
Template Predicted Secondary structure																																												.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions