Job Description P30855 Confidence 93.49% Date Thu Jan 5 11:46:34 GMT 2012 Rank 381 Aligned Residues 134 % Identity 15% Template d1tfda_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.30

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																								.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	.	.	.	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	.	.	.	.	.	.	.	.	.	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T
Query Conservation																																								.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	S	M	K	K	V	L	P	E	D	G	P	R	I	I	C	V	K	K	A	S	Y	L	D	C	I	K	A	I	A	A	H	E	A	D	A	V	T	L	D	A	G	L	V	H	E	A	G	L	T	P	N	N	L	K	P	V	V	A	E	F	Y	G	S	K	E	N	P	K	T	F	Y	Y	A	V	A	L	V	K
Template Known Secondary structure						T	T	T	S		S	S	S									S	S										T	T	S			B													T	T	T	T											S		S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	D	S	M	R	P	L	T	S	P	K	P	V	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		K	G	S	N	F	.	Q	L	N	E	L	Q	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	Y	C	D	L	P	E	P	R	K	P	L	E	K	A	V	A	S	F	F	S	G	S	C	V	P	C	A	D	Q	L	C	Q	L	C	P	G	C	G	C	S	S	S	Q	P	Y	F
Template Known Secondary structure		T	T				.		T	T			T	T						S		T	T		T	T	T	T								T	T	T	S		S			S	S							T	T	S	S	S				T	T					B	S	S	S	T	T			S	S	S		S	S	S	S
Template Predicted Secondary structure							.
Template SS confidence
		103	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	.	Y	F	I	G	S	N	I	I	T	S	S
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		G	Y	S	G	A	F	K	C	L	K	D	G	L	G	D	V	A	F	V	K	Q	E	T	I	F	E	N
Template Known Secondary structure		S									T	T	T	S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions